RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 DNAJB2P25686 324 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 CTNNB1P35222 781 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 CDH8P55286 799 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 ZBED6P86452 979 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 HABP4Q5JVS0 413 aaKnown RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 FAM171A1Q5VUB5 890 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 WSCD1Q658N2 575 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 PDXDC1Q6P996 788 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 SCARA5Q6ZMJ2 495 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 CACNA2D4Q7Z3S7 1137 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 METTL23Q86XA0 190 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 FAM71AQ8IYT1 594 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 ADGRF2Q8IZF7 708 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 SYN2Q92777 582 aaPredicted RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 MRPL45Q9BRJ2 306 aaKnown RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 TTPALQ9BTX7 342 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 OXCT2Q9BYC2 517 aaPredicted RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 NUCKS1Q9H1E3 243 aaKnown RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 NKX2-4Q9H2Z4 354 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 SLC28A3Q9HAS3 691 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 COLQQ9Y215 455 aaPredicted RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 STXBP5LQ9Y2K9 1186 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 LUC7L2Q9Y383 392 aaKnown RBP12.3□□□□□ -0.44
GGA3-211ENST00000582232 SZT2Q5T011 3432 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 CHD7Q9P2D1 2997 aa12.3□□□□□ -0.44
GGA3-211ENST00000582232 F8VZ95 297 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 H3BNC9 293 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 RNF225M0QZC1 329 aaPredicted RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 TBC1D4O60343 1298 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 TKTP29401 623 aaKnown RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 CASP14P31944 242 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 GNL1P36915 607 aaPredicted RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
GGA3-211ENST00000582232 ZNF132P52740 706 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 DSG1Q02413 1049 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 YWHAHQ04917 246 aaPredicted RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 ARHGAP44Q17R89 818 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 RTP2Q5QGT7 225 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 VARS2Q5ST30 1063 aaKnown RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 KIAA0319Q5VV43 1072 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 PPP2R2DQ66LE6 453 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 OVOS1Q6IE37 1185 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 ANKS3Q6ZW76 656 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 PPFIBP1Q86W92 1011 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 OSTM1Q86WC4 334 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 ZNF397Q8NF99 534 aaPredicted RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 SPPL3Q8TCT6 385 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 ANP32BQ92688 251 aaKnown RBP12.29□□□□□ -0.44
GGA3-211ENST00000582232 TIFAQ96CG3 184 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 PDLIM2Q96JY6 352 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 SPAG5Q96R06 1193 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 ACBD6Q9BR61 282 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 NLRC4Q9NPP4 1024 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 SSX2IPQ9Y2D8 614 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 IRAK3Q9Y616 596 aa12.29□□□□□ -0.44
GGA3-211ENST00000582232 TRANK1O15050 2925 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 TMEM265A0A087WTH1 108 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 H7C4K7 107 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 LILRB3O75022 631 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 PAEPP09466 180 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 TPM1P09493 284 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 CTSAP10619 480 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 PCSK1P29120 753 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 HNRNPH3P31942 346 aaKnown RBP12.28□□□□□ -0.44
GGA3-211ENST00000582232 SOX5P35711 763 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 STAT1P42224 750 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 NDST1P52848 882 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 RAD23BP54727 409 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 CNGA4Q8IV77 575 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 THEM5Q8N1Q8 247 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 LNX1Q8TBB1 728 aaPredicted RBP12.28□□□□□ -0.44
GGA3-211ENST00000582232 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 RTP3Q9BQQ7 232 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 NT5C1AQ9BXI3 368 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 DNAI2Q9GZS0 605 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 ZBP1Q9H171 429 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 SNX25Q9H3E2 840 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 DDX43Q9NXZ2 648 aaKnown RBP12.28□□□□□ -0.44
GGA3-211ENST00000582232 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 KIAA1257Q9ULG3 409 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 NME7Q9Y5B8 376 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 PCDHB4Q9Y5E5 795 aa12.28□□□□□ -0.44
GGA3-211ENST00000582232 TIMM13Q9Y5L4 95 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms