RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 CDY1Q9Y6F8 540 aa21.48■■□□□ 1.03
TOP3A-213ENST00000582230 LRRC10BA6NIK2 292 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 CLCN4P51793 760 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 KRT31Q15323 416 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 CCDC85BQ15834 202 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 MIIPQ5JXC2 388 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 SPOPLQ6IQ16 392 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 RSPO2Q6UXX9 243 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 EHBP1Q8NDI1 1231 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 MAFAQ8NHW3 353 aaPredicted RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 HSD3B7Q9H2F3 369 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 CYP3A43Q9HB55 503 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 APOBEC3GQ9HC16 384 aaKnown RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 DDX43Q9NXZ2 648 aaKnown RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 LIMA1Q9UHB6 759 aaKnown RBP21.47■■□□□ 1.03
TOP3A-213ENST00000582230 DPP7Q9UHL4 492 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 POLIQ9UNA4 740 aa21.47■■□□□ 1.03
TOP3A-213ENST00000582230 SCN1AP35498 2009 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 GLUD1P00367 558 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 SRGAP2BP0DMP2 458 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 PCSK1P29120 753 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 ADAM15Q13444 863 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 KCNC3Q14003 757 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 COL19A1Q14993 1142 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 ELMSAN1Q6PJG2 1045 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 TMEM184AQ6ZMB5 413 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 GLYCTKQ8IVS8 523 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 LMO3Q8TAP4 145 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 SLC22A17Q8WUG5 538 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 KBTBD7Q8WVZ9 684 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 ACBD6Q9BR61 282 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 BCO2Q9BYV7 579 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 SNX25Q9H3E2 840 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.03
TOP3A-213ENST00000582230 TAB2Q9NYJ8 693 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 HCFC2Q9Y5Z7 792 aa21.46■■□□□ 1.03
TOP3A-213ENST00000582230 GOLGA6L19H0YKK7 550 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 PES1O00541 588 aaKnown RBP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 ADAM12O43184 909 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 LRRN2O75325 713 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 GTF2F1P35269 517 aaKnown RBP eCLIP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 GNL1P36915 607 aaPredicted RBP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 ASPAP45381 313 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 CTC1Q2NKJ3 1217 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 TPGS2Q68CL5 300 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 LILRA6Q6PI73 481 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 GBP6Q6ZN66 633 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 LUZP1Q86V48 1076 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 PALB2Q86YC2 1186 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 ZNF461Q8TAF7 563 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 HDAC7Q8WUI4 952 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 PPM1EQ8WY54 764 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 CASP10Q92851 521 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 ELMO3Q96BJ8 720 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 PABPC5Q96DU9 382 aaKnown RBP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 NT5C1BQ96P26 610 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 RTP3Q9BQQ7 232 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 MRPL45Q9BRJ2 306 aaKnown RBP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 ANP32EQ9BTT0 268 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 FAM124BQ9H5Z6 455 aaPredicted RBP21.45■■□□□ 1.02
TOP3A-213ENST00000582230 SMYD3Q9H7B4 428 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 GCNT4Q9P109 453 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 MAFFQ9ULX9 164 aa21.45■■□□□ 1.02
TOP3A-213ENST00000582230 SZT2Q5T011 3432 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 TGM5O43548 720 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 CPB1P15086 417 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 ARPP19P56211 112 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 TSPY1Q01534 308 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 ROR1Q01973 937 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 SMARCB1Q12824 385 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 GPR17Q13304 367 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 SKIV2LQ15477 1246 aaKnown RBP21.44■■□□□ 1.02
TOP3A-213ENST00000582230 EXOC3L4Q17RC7 722 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 SCARA5Q6ZMJ2 495 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 DCP1BQ8IZD4 617 aaKnown RBP21.44■■□□□ 1.02
TOP3A-213ENST00000582230 TTC39CQ8N584 583 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 OR6B3Q8NGW1 331 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 OR10T2Q8NGX3 314 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 TATDN2Q93075 761 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 ZCWPW1Q9H0M4 648 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 VPS16Q9H269 839 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 PLEKHA4Q9H4M7 779 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 TRANK1O15050 2925 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 CDH23Q9H251 3354 aa21.44■■□□□ 1.02
TOP3A-213ENST00000582230 MYO9BQ13459 2157 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 ABLIM3O94929 683 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 TBXAS1P24557 533 aaPredicted RBP21.43■■□□□ 1.02
TOP3A-213ENST00000582230 COPB1P53618 953 aaKnown RBP21.43■■□□□ 1.02
TOP3A-213ENST00000582230 CDH8P55286 799 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 LLGL2Q6P1M3 1020 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 OSTM1Q86WC4 334 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 VN1R2Q8NFZ6 395 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 INTS2Q9H0H0 1204 aaKnown RBP21.43■■□□□ 1.02
TOP3A-213ENST00000582230 SDCBP2Q9H190 292 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 DZANK1Q9NVP4 752 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 CLDND1Q9NY35 253 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 CDH9Q9ULB4 789 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 VWA8A3KMH1 1905 aa21.43■■□□□ 1.02
TOP3A-213ENST00000582230 WDR27A2RRH5 827 aa21.42■■□□□ 1.02
TOP3A-213ENST00000582230 A8MXQ7 604 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms