RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 ZFHX2Q9C0A1 2572 aaPredicted RBP16.58■□□□□ 0.24
CCDC57-215ENST00000582100 KIAA0391O15091 583 aaKnown RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 FGF19O95750 216 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 PSMC3P17980 439 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 WNT7BP56706 349 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 WSCD1Q658N2 575 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 CNNM4Q6P4Q7 775 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 SHC4Q6S5L8 630 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 DNAJB7Q7Z6W7 309 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 ITIH5Q86UX2 942 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 C2orf15Q8WU43 125 aaKnown RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 DEPDC1BQ8WUY9 529 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 NKD2Q969F2 451 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-215ENST00000582100 E2F7Q96AV8 911 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 BRD9Q9H8M2 597 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 LTB4R2Q9NPC1 389 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 TRPV5Q9NQA5 729 aa16.57■□□□□ 0.24
CCDC57-215ENST00000582100 A0A1W2PRU2 124 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 FAM170BA6NMN3 283 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 LRRN2O75325 713 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 ZSCAN22P10073 491 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-215ENST00000582100 MAGEA9P43362 315 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 GRM2Q14416 872 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 UBXN2BQ14CS0 331 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 VITQ6UXI7 678 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 ZNF852Q6ZMS4 543 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 TPRG1Q6ZUI0 275 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 MFSD6LQ8IWD5 586 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 GPD1LQ8N335 351 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 TTC9BQ8N6N2 239 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 C1orf127Q8N9H9 656 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 SPPL2BQ8TCT7 592 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 KCNG4Q8TDN1 519 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 IRF7Q92985 503 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 SEMA4AQ9H3S1 761 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 PCIF1Q9H4Z3 704 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 HEBP1Q9NRV9 189 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 ITGA11Q9UKX5 1188 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 MRPS17Q9Y2R5 130 aaKnown RBP16.56■□□□□ 0.24
CCDC57-215ENST00000582100 MTF2Q9Y483 593 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-215ENST00000582100 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
CCDC57-215ENST00000582100 CFAP54Q96N23 3096 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 TCHHQ07283 1943 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 NCAM2O15394 837 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 SOAT2O75908 522 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 F13A1P00488 732 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 ITGB3P05106 788 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 CD72P21854 359 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 POLR2BP30876 1174 aaKnown RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 VIPR2P41587 438 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 FOXD4L5Q5VV16 416 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 DCP1BQ8IZD4 617 aaKnown RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 CXorf38Q8TB03 319 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 FOXD4L4Q8WXT5 416 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 CLDN23Q96B33 292 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 DHX58Q96C10 678 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 C7orf25Q9BPX7 421 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 MAGEF1Q9HAY2 307 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 ZNF334Q9HCZ1 680 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-215ENST00000582100 AGAP1Q9UPQ3 857 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 COL4A3Q01955 1670 aa16.55■□□□□ 0.24
CCDC57-215ENST00000582100 SHISA7A6NL88 538 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 HEPACAM2A8MVW5 462 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 MAN2B1O00754 1011 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 SP9P0CG40 484 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 TARSP26639 723 aaKnown RBP16.54■□□□□ 0.24
CCDC57-215ENST00000582100 GDI1P31150 447 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 HOXD13P35453 343 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 ASIC1P78348 528 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 VEPH1Q14D04 833 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 SURF1Q15526 300 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 MGAT5BQ3V5L5 792 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 GLIS3Q8NEA6 775 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 HPS3Q969F9 1004 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
CCDC57-215ENST00000582100 MKNK1Q9BUB5 465 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 ATXN3LQ9H3M9 355 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 GDAP2Q9NXN4 497 aa16.54■□□□□ 0.24
CCDC57-215ENST00000582100 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
CCDC57-215ENST00000582100 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
CCDC57-215ENST00000582100 ZNF263O14978 683 aa16.53■□□□□ 0.24
CCDC57-215ENST00000582100 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
CCDC57-215ENST00000582100 HUS1O60921 280 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms