RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 TRIM75PA6NK02 468 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 PPP6CO00743 305 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 CD1AP06126 327 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 EBLN1P0CF75 366 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 AWAT2Q6E213 333 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 SLC18B1Q6NT16 456 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 CEP85Q6P2H3 762 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 SLC17A8Q8NDX2 589 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 TDP1Q9NUW8 608 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 TBC1D30Q9Y2I9 924 aa4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 TMA7Q9Y2S6 64 aaKnown RBP4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.68□□□□□ -1.66
SMCHD1-206ENST00000581631 PPEF2O14830 753 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 GPR39O43194 453 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 ANXA1P04083 346 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 ZFXP17010 805 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 CCKBRP32239 447 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 SOX5P35711 763 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 NDUFV1P49821 464 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 FHL1Q13642 323 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 GPR162Q16538 588 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 ZNF551Q7Z340 670 aaPredicted RBP4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 DENND1AQ8TEH3 1009 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 SSH1Q8WYL5 1049 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 TBC1D5Q92609 795 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 FKBP10Q96AY3 582 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 SH2D3AQ9BRG2 576 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 MRPS18AQ9NVS2 196 aaKnown RBP4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 IPPQ9Y573 584 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 PCDHA13Q9Y5I0 950 aa4.67□□□□□ -1.66
SMCHD1-206ENST00000581631 JTBO76095 146 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 TUBB4AP04350 444 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 EDNRBP24530 442 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 NR4A2P43354 598 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 LAMB3Q13751 1172 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 BMPR2Q13873 1038 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 RAB39AQ14964 217 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 SDE2Q6IQ49 451 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 RSPH3Q86UC2 560 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 COG1Q8WTW3 980 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 SMOQ99835 787 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 SPRTNQ9H040 489 aaPredicted RBP4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 SMOC2Q9H3U7 446 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 SERHLQ9NQF3 203 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 MTMR4Q9NYA4 1195 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 ZNF580Q9UK33 172 aa4.66□□□□□ -1.66
SMCHD1-206ENST00000581631 TOB1P50616 345 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 CCT4P50991 539 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 TCF15Q12870 199 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PLAC9Q5JTB6 97 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PRAMEF17Q5VTA0 474 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 SLC2A7Q6PXP3 512 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 MIGA2Q7L4E1 593 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 KRT73Q86Y46 540 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PDSS2Q86YH6 399 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PPM1NQ8N819 430 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 SCAMP4Q969E2 229 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 ACTRT3Q9BYD9 372 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 ANLNQ9NQW6 1124 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 ELOVL5Q9NYP7 299 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 CALCOCO1Q9P1Z2 691 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PCDHB1Q9Y5F3 818 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 NR2E3Q9Y5X4 410 aa4.65□□□□□ -1.67
SMCHD1-206ENST00000581631 PRSS29PA6NIE9 313 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 NT5C1B-RDH14C9J2C7 533 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 PRRT4C9JH25 899 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 F5H697 171 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 H0YIZ8 118 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 HTRA2O43464 458 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 TRIAP1O43715 76 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 CYP2D6P10635 497 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 HSD3B2P26439 372 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 INAVAQ3KP66 663 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 TAF2Q6P1X5 1199 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 SPATS2Q86XZ4 545 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 PSD4Q8NDX1 1056 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 KLHDC4Q8TBB5 520 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 CHAC2Q8WUX2 184 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 TPSD1Q9BZJ3 242 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 PRSS22Q9GZN4 317 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 SLKQ9H2G2 1235 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 ARHGEF3Q9NR81 526 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 SH3BP4Q9P0V3 963 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 LRP12Q9Y561 859 aa4.64□□□□□ -1.67
SMCHD1-206ENST00000581631 POLRMTO00411 1230 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 IGSF3O75054 1194 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 NDUFS2O75306 463 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 C5AR1P21730 350 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 KLF1Q13351 362 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 IL10RAQ13651 578 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 RAPGEF1Q13905 1077 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 TBCCQ15814 346 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 C3orf36Q3SXR2 165 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 AARS2Q5JTZ9 985 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 ANKRD16Q6P6B7 361 aa4.63□□□□□ -1.67
SMCHD1-206ENST00000581631 SLC30A10Q6XR72 485 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms