RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 TRAPPC10P48553 1259 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 TUFMP49411 452 aaKnown RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 AARSP49588 968 aaKnown RBP eCLIP10.79□□□□□ -0.68
RFFL-208ENST00000581039 MCM2P49736 904 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 AMPD2Q01433 879 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 VEPH1Q14D04 833 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 ZBTB6Q15916 424 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 RNF43Q68DV7 783 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 ZPBP2Q6X784 338 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 C1orf186Q6ZWK4 172 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 TMEM130Q8N3G9 435 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 CAMKK1Q8N5S9 505 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 C4orf32Q8N8J7 132 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 SEPT5Q99719 369 aaPredicted RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 TIPINQ9BVW5 301 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 SMOC1Q9H4F8 434 aa10.79□□□□□ -0.68
RFFL-208ENST00000581039 RALYQ9UKM9 306 aaKnown RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 NOL7Q9UMY1 257 aaKnown RBP10.79□□□□□ -0.68
RFFL-208ENST00000581039 TTC26A0AVF1 554 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 LACTBL1A8MY62 500 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 PRAMEF12O95522 483 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 MAPTP10636 758 aaKnown RBP10.78□□□□□ -0.68
RFFL-208ENST00000581039 PLS3P13797 630 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 PAX3P23760 479 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 NEK4P51957 841 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 CYP4F8P98187 520 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 PPP2R3AQ06190 1150 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 MCL1Q07820 350 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 MAPK7Q13164 816 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 RUNX3Q13761 415 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 KYAT1Q16773 422 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 TMEM196Q5HYL7 178 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 FSTL4Q6MZW2 842 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 PSAPL1Q6NUJ1 521 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
RFFL-208ENST00000581039 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 TMEM161BQ8NDZ6 487 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 BICD1Q96G01 975 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 TSPAN18Q96SJ8 248 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 SLC46A2Q9BY10 475 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 SMG9Q9H0W8 520 aaKnown RBP10.78□□□□□ -0.68
RFFL-208ENST00000581039 SH2B1Q9NRF2 756 aaPredicted RBP10.78□□□□□ -0.68
RFFL-208ENST00000581039 ZMYM5Q9UJ78 669 aa10.78□□□□□ -0.68
RFFL-208ENST00000581039 CEP295Q9C0D2 2601 aa10.77□□□□□ -0.68
RFFL-208ENST00000581039 H0YCG3 227 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 TRDMT1O14717 391 aaKnown RBP10.77□□□□□ -0.69
RFFL-208ENST00000581039 RHOBTB1O94844 696 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 ODC1P11926 461 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 GUCY2CP25092 1073 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 AVPR1AP37288 418 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 GUCY2FP51841 1108 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 LILRA4P59901 499 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 NBR1Q14596 966 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 ZRSR1Q15695 479 aaKnown RBP10.77□□□□□ -0.69
RFFL-208ENST00000581039 ELF2Q15723 593 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 PLK5Q496M5 336 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 SLC39A12Q504Y0 691 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 CMTM8Q8IZV2 173 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 TTC9BQ8N6N2 239 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 EXOC4Q96A65 974 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 SENP8Q96LD8 212 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 FAM83CQ9BQN1 747 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 EBF3Q9H4W6 596 aa10.77□□□□□ -0.69
RFFL-208ENST00000581039 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
RFFL-208ENST00000581039 C4orf47A7E2U8 309 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 PP2D1A8MPX8 630 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 RNF40O75150 1001 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 CAVIN2O95810 425 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 EGFP01133 1207 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 DRD1P21728 446 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 CDC25AP30304 524 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 TNFSF9P41273 254 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 LIG4P49917 911 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 NOVA1P51513 510 aaKnown RBP10.76□□□□□ -0.69
RFFL-208ENST00000581039 GALK1P51570 392 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 CDR1P51861 262 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 CREB5Q02930 508 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 BFSP1Q12934 665 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 DAB2IPQ5VWQ8 1189 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 SPATA1Q5VX52 437 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 TRIM68Q6AZZ1 485 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 TCEAL6Q6IPX3 200 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 DTHD1Q6ZMT9 781 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 METTL23Q86XA0 190 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 CD302Q8IX05 232 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 THEM5Q8N1Q8 247 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 MAB21L3Q8N8X9 362 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 FBXO18Q8NFZ0 1043 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 OR10T2Q8NGX3 314 aa10.76□□□□□ -0.69
RFFL-208ENST00000581039 GIPC2Q8TF65 315 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms