RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ZNF202O95125 648 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 POU2F2P09086 479 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 ATF6P18850 670 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 GPR15P49685 360 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 GPR17Q13304 367 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 STXBP5Q5T5C0 1151 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
CBX1-206ENST00000581003 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 UBALD2Q8IYN6 164 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 FBXL6Q8N531 539 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
CBX1-206ENST00000581003 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 PLA2G2FQ9BZM2 168 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 ZNF334Q9HCZ1 680 aaPredicted RBP13.55□□□□□ -0.24
CBX1-206ENST00000581003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.55□□□□□ -0.24
CBX1-206ENST00000581003 ITGA11Q9UKX5 1188 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 MRPS23Q9Y3D9 190 aaKnown RBP13.55□□□□□ -0.24
CBX1-206ENST00000581003 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 SNX9Q9Y5X1 595 aa13.55□□□□□ -0.24
CBX1-206ENST00000581003 KRBA1A5PL33 1030 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 CST3P01034 146 aaPredicted RBP13.54□□□□□ -0.24
CBX1-206ENST00000581003 MYL4P12829 197 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 NPR3P17342 541 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 FCARP24071 287 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 DLG4P78352 724 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 PNOCQ13519 176 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 MYBPC2Q14324 1141 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 PSMD6Q15008 389 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 SDHAF4Q5VUM1 108 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 TRAPPC11Q7Z392 1133 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 BMP8AQ7Z5Y6 402 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 GPIHBP1Q8IV16 184 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 WDR49Q8IV35 697 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 FMR1NBQ8N0W7 255 aaPredicted RBP13.54□□□□□ -0.24
CBX1-206ENST00000581003 LRRC52Q8N7C0 313 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 TMEM105Q8N8V8 129 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 PRSS33Q8NF86 280 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 ZNF560Q96MR9 790 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 CGRRF1Q99675 332 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 LRRC3Q9BY71 257 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 CA14Q9ULX7 337 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
CBX1-206ENST00000581003 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
CBX1-206ENST00000581003 LRRIQ3A6PVS8 624 aaPredicted RBP13.53□□□□□ -0.24
CBX1-206ENST00000581003 EXOC3O60645 756 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 ATP2C2O75185 946 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 TNNC2P02585 160 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 PTPN2P17706 415 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 RBP5P82980 135 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 SNW1Q13573 536 aaKnown RBP13.53□□□□□ -0.24
CBX1-206ENST00000581003 TEAD2Q15562 447 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 SIX5Q8N196 739 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 GIPC2Q8TF65 315 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
CBX1-206ENST00000581003 KBTBD7Q8WVZ9 684 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 HPDLQ96IR7 371 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 PKMYT1Q99640 499 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
CBX1-206ENST00000581003 IGSF9Q9P2J2 1179 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
CBX1-206ENST00000581003 A0A1W2PRU2 124 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 KIAA0391O15091 583 aaKnown RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 PI15O43692 258 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 RHOBTB3O94955 611 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 NR3C1P04150 777 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 TNNI1P19237 187 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 LMO2P25791 158 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 PNPLA4P41247 253 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 PSMC1P62191 440 aaKnown RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 GPC5P78333 572 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 NUCB2P80303 420 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 DUOXA2Q1HG44 320 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 TANGO2Q6ICL3 276 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 METTL23Q86XA0 190 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 SUGP1Q8IWZ8 645 aaKnown RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 ADGRF2Q8IZF7 708 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 FLCNQ8NFG4 579 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 RSPRY1Q96DX4 576 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 EEF2KMTQ96G04 330 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.25
CBX1-206ENST00000581003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.252e-8■■■■■ 67.3
CBX1-206ENST00000581003 DMAC2Q9NW81 257 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
CBX1-206ENST00000581003 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms