RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 POLR3CQ9BUI4 534 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 AFF4Q9UHB7 1163 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 USP20Q9Y2K6 914 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 YIPF1Q9Y548 306 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 OBSL1O75147 1896 aa8.46□□□□□ -1.06
SMARCE1-217ENST00000580654 TRAPPC3O43617 180 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC37A4O43826 429 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 CD59P13987 128 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 GALK1P51570 392 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 EXOSC10Q01780 885 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 RUNX3Q13761 415 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 TTC22Q5TAA0 569 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 EEF1DP3Q658K8 133 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 TRIM68Q6AZZ1 485 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC23A3Q6PIS1 610 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 HAUS6Q7Z4H7 955 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 RASSF3Q86WH2 238 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 FRMD1Q8N878 549 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 PNPLA1Q8N8W4 532 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 SPRYD3Q8NCJ5 442 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 BEST2Q8NFU1 509 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 CAMK1GQ96NX5 476 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 HNRNPABQ99729 332 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 LXNQ9BS40 222 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 SMG9Q9H0W8 520 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 FZD8Q9H461 694 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 GKN1Q9NS71 199 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 RGL1Q9NZL6 768 aa8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 ATXN2Q99700 1313 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 URB1O60287 2271 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-217ENST00000580654 TEX15Q9BXT5 2789 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 ZNF638Q14966 1978 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 PTPN13Q12923 2485 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 A0A087WV48 116 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 FAM187AA6NFU0 413 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 DPYSL4O14531 572 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 SYN3O14994 580 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 ATXN7O15265 892 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 PRPF3O43395 683 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 DKC1O60832 514 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 FTH1P19P0C7X4 201 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 WEE1P30291 646 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 RDXP35241 583 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 PTGER3P43115 390 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 MCM2P49736 904 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 CTTNQ14247 550 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 NECTIN1Q15223 517 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 CTXN3Q4LDR2 81 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 USP39Q53GS9 565 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 GPR158Q5T848 1215 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 PEAR1Q5VY43 1037 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 ARMCX6Q7L4S7 300 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 ZNF605Q86T29 641 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 C11orf74Q86VG3 221 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 ZNF843Q8N446 348 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 OR2I1PQ8NGU4 316 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 OLIG1Q8TAK6 271 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 RIN3Q8TB24 985 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 DYDC2Q96IM9 177 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 PRIMPOLQ96LW4 560 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 UROC1Q96N76 676 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 FNBP1Q96RU3 617 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 NUSAP1Q9BXS6 441 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 LSG1Q9H089 658 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 EBF3Q9H4W6 596 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 VPS54Q9P1Q0 977 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 DKK4Q9UBT3 224 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 TBX20Q9UMR3 447 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
SMARCE1-217ENST00000580654 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 KLF18A0A0U1RQI7 1052 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 SMIM28A0A1B0GU29 152 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 H7C4K7 107 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 M0R2N6 131 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 TNFRSF10BO14763 440 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 N4BP3O15049 544 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 MAP3K7O43318 606 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 OR4Q2P0C623 313 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 HNRNPLP14866 589 aaKnown RBP eCLIP8.43□□□□□ -1.063e-11■■□□□ 13.3
SMARCE1-217ENST00000580654 ARSAP15289 507 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 DRD1P21728 446 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 COPS2P61201 443 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 CYP4F8P98187 520 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 CYP4A11Q02928 519 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 EPHA7Q15375 998 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 TRIP6Q15654 476 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 FAM187BQ17R55 369 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 CREB3L3Q68CJ9 461 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 CDCA2Q69YH5 1023 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 OTUD6AQ7L8S5 288 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 SLCO6A1Q86UG4 719 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 MARCH9Q86YJ5 346 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 SYT12Q8IV01 421 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 TMEFF1Q8IYR6 380 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 349.5 ms