RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 AGPSO00116 658 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GALCP54803 685 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 GCNT1Q02742 428 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TTC19Q6DKK2 380 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DAAM2Q86T65 1068 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PCDHB18PQ96TA0 734 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SYT11Q9BT88 431 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IMPG2Q9BZV3 1241 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 DNM1LO00429 736 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CYP11B1P15538 503 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 CHRNB2P17787 502 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 AXLP30530 894 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SOX4Q06945 474 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 SGSM1Q2NKQ1 1148 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 PEX26Q7Z412 305 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 MMGT1Q8N4V1 131 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 FAM105AQ9NUU6 356 aa13.52□□□□□ -0.24
CDK5RAP3-217ENST00000580287 IVLP07476 585 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MLH1P40692 756 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PAK2Q13177 524 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 C2CD6Q53TS8 623 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CTNNBL1Q8WYA6 563 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GAD1Q99259 594 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AGPAT1Q99943 283 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ADAM2Q99965 735 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SDCBP2Q9H190 292 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ERVK-5Q9HDB9 667 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 MIOSQ9NXC5 875 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 OGDHLQ9ULD0 1010 aa13.52□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GPR182O15218 404 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CEP104O60308 925 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.256e-7■■■□□ 17.4
CDK5RAP3-217ENST00000580287 GLI1P08151 1106 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RFX1P22670 979 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CDK7P50613 346 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AP3M2P53677 418 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HPDLQ96IR7 371 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 OSGEPQ9NPF4 335 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ANXA13P27216 316 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ASPAP45381 313 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GPATCH11Q8N954 259 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 IFT81Q8WYA0 676 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CISHQ9NSE2 258 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 C2CD2Q9Y426 696 aa13.51□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PTGESO14684 152 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KIF4AO95239 1232 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM153BP0C7A2 387 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM153CQ494X1 144 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 AGMOQ6ZNB7 445 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PHLDB2Q86SQ0 1253 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RTN4RL1Q86UN2 441 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KLHL7Q8IXQ5 586 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GSTCDQ8NEC7 633 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KRT12Q99456 494 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 NIF3L1Q9GZT8 377 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ACBD3Q9H3P7 528 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FAM153AQ9UHL3 310 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 LAMA3Q16787 3333 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CARSP49589 748 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 FMO1Q01740 532 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 GPNMBQ14956 572 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SLC35G2Q8TBE7 412 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 DDX1Q92499 740 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 SCLYQ96I15 445 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CNTN3Q9P232 1028 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 STIM2Q9P246 746 aa13.5□□□□□ -0.25
CDK5RAP3-217ENST00000580287 HCRTO43612 131 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CCL23P55773 120 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ITIH3Q06033 890 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 PTPN11Q06124 597 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 KYAT1Q16773 422 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZNF667Q5HYK9 610 aa13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 ZNF572Q7Z3I7 529 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-217ENST00000580287 CTU1Q7Z7A3 348 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms