RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CDC25CP30307 473 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 UBA7P41226 1012 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 CXCL12P48061 93 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 TUFMP49411 452 aaKnown RBP14.48□□□□□ -0.09
TRAF4-214ENST00000580073 FCHO2Q0JRZ9 810 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 TAF12Q16514 161 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 TMEM119Q4V9L6 283 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 SEZ6Q53EL9 994 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 TSSK4Q6SA08 328 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 RALGPS2Q86X27 583 aaPredicted RBP14.48□□□□□ -0.09
TRAF4-214ENST00000580073 SPEM1Q8N4L4 309 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 PSMG2Q969U7 264 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 EPSTI1Q96J88 318 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 PLIN2Q99541 437 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 MSTO1Q9BUK6 570 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 LMAN1LQ9HAT1 526 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 RCOR1Q9UKL0 485 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 KIAA1549LQ6ZVL6 1849 aa14.48□□□□□ -0.09
TRAF4-214ENST00000580073 MTMR11A4FU01 709 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 SPTLC2O15270 562 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 MOSPD3O75425 235 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 PAPSS2O95340 614 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-214ENST00000580073 YEATS4O95619 227 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 VIPR2P41587 438 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 POU5F1Q01860 360 aaKnown RBP14.47□□□□□ -0.09
TRAF4-214ENST00000580073 FZD5Q13467 585 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 TMEM132DQ14C87 1099 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 STK38Q15208 465 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 SPATA1Q5VX52 437 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 SLFN12LQ6IEE8 588 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-214ENST00000580073 GPBP1Q86WP2 473 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 TMC8Q8IU68 726 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 SYNPOQ8N3V7 929 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 MYCT1Q8N699 235 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 EXOC4Q96A65 974 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 ZSWIM3Q96MP5 696 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 ZNF560Q96MR9 790 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 THG1LQ9NWX6 298 aaKnown RBP14.47□□□□□ -0.09
TRAF4-214ENST00000580073 TBX20Q9UMR3 447 aa14.47□□□□□ -0.09
TRAF4-214ENST00000580073 MYO16Q9Y6X6 1858 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 A0A087X0B3 334 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 LACTBL1A8MY62 500 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ARNTLO00327 626 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 RETP07949 1114 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 GJA1P17302 382 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 CCNE1P24864 410 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 WEE1P30291 646 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 LONP1P36776 959 aaKnown RBP14.46□□□□□ -0.09
TRAF4-214ENST00000580073 TNFSF9P41273 254 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 LILRA4P59901 499 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 NUCB2P80303 420 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 DUSP4Q13115 394 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ZBTB6Q15916 424 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ENOX2Q16206 610 aaKnown RBP14.46□□□□□ -0.09
TRAF4-214ENST00000580073 CENPPQ6IPU0 288 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 PRR23BQ6ZRT6 265 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ZNF687Q8N1G0 1237 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 THEM5Q8N1Q8 247 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 SPPL2BQ8TCT7 592 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 NETO1Q8TDF5 533 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 LEO1Q8WVC0 666 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-214ENST00000580073 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 IPO9Q96P70 1041 aaKnown RBP14.46□□□□□ -0.09
TRAF4-214ENST00000580073 REEP2Q9BRK0 252 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ATXN3LQ9H3M9 355 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 ASB7Q9H672 318 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 PCDHA7Q9UN72 937 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 C2CD2Q9Y426 696 aa14.46□□□□□ -0.09
TRAF4-214ENST00000580073 TIMM13Q9Y5L4 95 aaPredicted RBP14.46□□□□□ -0.09
TRAF4-214ENST00000580073 FRYLO94915 3013 aa14.46□□□□□ -0.1
TRAF4-214ENST00000580073 SLC38A8A6NNN8 435 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 MEFVO15553 781 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 TRAK2O60296 914 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 PPP6R2O75170 966 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CYP11A1P05108 521 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 ADRB2P07550 413 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 OR4Q2P0C623 313 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CHRNB1P11230 501 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 TDGF1P13385 188 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 DDX6P26196 483 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 GABRR2P28476 465 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CTHP32929 405 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 TAF6P49848 677 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 ZNF131P52739 623 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 AMPD2Q01433 879 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 SPAG1Q07617 926 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 SIM2Q14190 667 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 KARSQ15046 597 aaKnown RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 MGAT5BQ3V5L5 792 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 GPR158Q5T848 1215 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 ATL3Q6DD88 541 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 JADE1Q6IE81 842 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 LONP2Q86WA8 852 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 NT5DC4Q86YG4 428 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 ARID3BQ8IVW6 561 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 KRI1Q8N9T8 703 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms