RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ABLIM1O14639 778 aa7□□□□□ -1.29
COPS3-216ENST00000579716 MAPK13O15264 365 aa7□□□□□ -1.29
COPS3-216ENST00000579716 YKT6O15498 198 aa7□□□□□ -1.29
COPS3-216ENST00000579716 IRAK2O43187 625 aa7□□□□□ -1.29
COPS3-216ENST00000579716 AP1G1O43747 822 aa7□□□□□ -1.29
COPS3-216ENST00000579716 ADCY3O60266 1144 aa7□□□□□ -1.29
COPS3-216ENST00000579716 EFCAB14O75071 495 aa7□□□□□ -1.29
COPS3-216ENST00000579716 SLU7O95391 586 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 EFEMP2O95967 443 aa7□□□□□ -1.29
COPS3-216ENST00000579716 CSTBP04080 98 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 SNRPA1P09661 255 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 ZGLP1P0C6A0 271 aa7□□□□□ -1.29
COPS3-216ENST00000579716 EPB41P11171 864 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 PRLRP16471 622 aa7□□□□□ -1.29
COPS3-216ENST00000579716 CNTFP26441 200 aa7□□□□□ -1.29
COPS3-216ENST00000579716 LIFRP42702 1097 aa7□□□□□ -1.29
COPS3-216ENST00000579716 MRPS15P82914 257 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 ACY1Q03154 408 aa7□□□□□ -1.29
COPS3-216ENST00000579716 GPS2Q13227 327 aa7□□□□□ -1.29
COPS3-216ENST00000579716 SLC14A1Q13336 389 aa7□□□□□ -1.29
COPS3-216ENST00000579716 SNX1Q13596 522 aa7□□□□□ -1.29
COPS3-216ENST00000579716 CCDC14Q49A88 953 aa7□□□□□ -1.29
COPS3-216ENST00000579716 HAUS3Q68CZ6 603 aa7□□□□□ -1.29
COPS3-216ENST00000579716 PGBD2Q6P3X8 592 aa7□□□□□ -1.29
COPS3-216ENST00000579716 B3GNT9Q6UX72 402 aa7□□□□□ -1.29
COPS3-216ENST00000579716 ZNF783Q6ZMS7 281 aa7□□□□□ -1.29
COPS3-216ENST00000579716 C15orf52Q6ZUT6 534 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 TMC6Q7Z403 805 aa7□□□□□ -1.29
COPS3-216ENST00000579716 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 FAM178BQ8IXR5 827 aa7□□□□□ -1.29
COPS3-216ENST00000579716 CMTR2Q8IYT2 770 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 FAM9CQ8IZT9 166 aa7□□□□□ -1.29
COPS3-216ENST00000579716 PPM1NQ8N819 430 aa7□□□□□ -1.29
COPS3-216ENST00000579716 PIWIL2Q8TC59 973 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 ASB12Q8WXK4 309 aa7□□□□□ -1.29
COPS3-216ENST00000579716 CCDC120Q96HB5 630 aa7□□□□□ -1.29
COPS3-216ENST00000579716 ZC3H10Q96K80 434 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 ATP6V1G3Q96LB4 118 aa7□□□□□ -1.29
COPS3-216ENST00000579716 MTMR9Q96QG7 549 aa7□□□□□ -1.29
COPS3-216ENST00000579716 FNBP1Q96RU3 617 aa7□□□□□ -1.29
COPS3-216ENST00000579716 WDR24Q96S15 920 aa7□□□□□ -1.29
COPS3-216ENST00000579716 NACAP1Q9BZK3 213 aa7□□□□□ -1.29
COPS3-216ENST00000579716 GLT8D2Q9H1C3 349 aa7□□□□□ -1.29
COPS3-216ENST00000579716 DDX4Q9NQI0 724 aaKnown RBP7□□□□□ -1.29
COPS3-216ENST00000579716 GPRC5BQ9NZH0 403 aa7□□□□□ -1.29
COPS3-216ENST00000579716 LCHNA4D1U4 455 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 RSPH10B2B2RC85 870 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 K7EPI3 171 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 NEMP1O14524 444 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 PSMA7O14818 248 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ASAP2O43150 1006 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 NUAK1O60285 661 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 KCNJ13O60928 360 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 KERAO60938 352 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 CSPG5O95196 566 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 MT-CO1P00395 513 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ADRB2P07550 413 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SNRNP70P08621 437 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 RSPH10BP0C881 870 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 PCNAP12004 261 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ACTN1P12814 892 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ABCB4P21439 1286 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 JAK1P23458 1154 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 L1CAMP32004 1257 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 RFC4P35249 363 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 TCF7P36402 384 aaPredicted RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 HNMTP50135 292 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 PSMD7P51665 324 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 AFF3P51826 1226 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 VCPP55072 806 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 RBP5P82980 135 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SPAG1Q07617 926 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 PPIDQ08752 370 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 DMPKQ09013 629 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 TRAP1Q12931 704 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 NFE2L1Q14494 772 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SART3Q15020 963 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 WDR43Q15061 677 aaKnown RBP eCLIP6.99□□□□□ -1.29
COPS3-216ENST00000579716 PCBP2Q15366 365 aaKnown RBP eCLIP6.99□□□□□ -1.29
COPS3-216ENST00000579716 LRRFIP1Q32MZ4 808 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 FBXO48Q5FWF7 155 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 IQSEC1Q6DN90 963 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ARHGAP11AQ6P4F7 1023 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 LEKR1Q6ZMV7 388 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 CEP97Q8IW35 865 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SCYL3Q8IZE3 742 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 XXYLT1Q8NBI6 393 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SLC4A11Q8NBS3 891 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 OR56B2PQ8NGI1 322 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 ETNPPLQ8TBG4 499 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 KISS1RQ969F8 398 aaPredicted RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 SHISA4Q96DD7 197 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 CABS1Q96KC9 395 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 PPP1R13BQ96KQ4 1090 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 FAM167AQ96KS9 214 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 TAAR9Q96RI9 348 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 TMEM120AQ9BXJ8 343 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 MRPL4Q9BYD3 311 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 B3GNT4Q9C0J1 378 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 DNAJC18Q9H819 358 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms