RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 MAN1C1Q9NR34 630 aa16.51■□□□□ 0.23
IFT20-208ENST00000578985 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
IFT20-208ENST00000578985 CD207Q9UJ71 328 aa16.51■□□□□ 0.23
IFT20-208ENST00000578985 POLIQ9UNA4 740 aa16.51■□□□□ 0.23
IFT20-208ENST00000578985 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 ASS1P00966 412 aaKnown RBP16.5■□□□□ 0.23
IFT20-208ENST00000578985 HOXB8P17481 243 aaPredicted RBP16.5■□□□□ 0.23
IFT20-208ENST00000578985 TFF2Q03403 129 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 NFKBIBQ15653 356 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 CLUL1Q15846 466 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 LEXMQ3ZCV2 418 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 OSTM1Q86WC4 334 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 FAM114A1Q8IWE2 563 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 CCDC150Q8NCX0 1101 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 FBXL13Q8NEE6 735 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 ZNF461Q8TAF7 563 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 ENOX1Q8TC92 643 aaKnown RBP16.5■□□□□ 0.23
IFT20-208ENST00000578985 HDAC7Q8WUI4 952 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 PI4K2AQ9BTU6 479 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 IMPG2Q9BZV3 1241 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 DNAJC25Q9H1X3 360 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 PLEKHA4Q9H4M7 779 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.5■□□□□ 0.23
IFT20-208ENST00000578985 FBXW11Q9UKB1 542 aa16.5■□□□□ 0.23
IFT20-208ENST00000578985 WDR27A2RRH5 827 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 N4BP1O75113 896 aaKnown RBP16.49■□□□□ 0.23
IFT20-208ENST00000578985 ABLIM3O94929 683 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 FAM163BP0C2L3 166 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 OR4Q2P0C623 313 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 P4HA1P13674 534 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 CPB1P15086 417 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 WARSP23381 471 aaKnown RBP16.49■□□□□ 0.23
IFT20-208ENST00000578985 LHX1P48742 406 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 FMO5P49326 533 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 MYL7Q01449 175 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 AAK1Q2M2I8 961 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 TPGS2Q68CL5 300 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 SPOPLQ6IQ16 392 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 SYCE2Q6PIF2 218 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 C12orf76Q8N812 135 aaPredicted RBP16.49■□□□□ 0.23
IFT20-208ENST00000578985 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 TMEM209Q96SK2 561 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 APOL5Q9BWW9 433 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 ZCWPW1Q9H0M4 648 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 RAB20Q9NX57 234 aa16.49■□□□□ 0.23
IFT20-208ENST00000578985 DDX43Q9NXZ2 648 aaKnown RBP16.49■□□□□ 0.23
IFT20-208ENST00000578985 MAGEC2Q9UBF1 373 aaPredicted RBP16.49■□□□□ 0.23
IFT20-208ENST00000578985 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
IFT20-208ENST00000578985 GABRDO14764 452 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 TACC1O75410 805 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 MTIF2P46199 727 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 KCNH2Q12809 1159 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 GPR17Q13304 367 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 RARS2Q5T160 578 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 LIN9Q5TKA1 542 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 KBTBD7Q8WVZ9 684 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 ATXN2LQ8WWM7 1075 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 S1PR5Q9H228 398 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 SMYD3Q9H7B4 428 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 SFXN1Q9H9B4 322 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 AFF4Q9UHB7 1163 aaKnown RBP16.48■□□□□ 0.23
IFT20-208ENST00000578985 COQ4Q9Y3A0 265 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 NFE2L3Q9Y4A8 694 aa16.48■□□□□ 0.23
IFT20-208ENST00000578985 SYCE3A1L190 88 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 PMM2O15305 246 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 P4HA2O15460 535 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 LRRN2O75325 713 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 AFPP02771 609 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 ACAT1P24752 427 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 PCSK1P29120 753 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 ELF1P32519 619 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 GNL1P36915 607 aaPredicted RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 TSPY1Q01534 308 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 ADCY1Q08828 1119 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 SMAD4Q13485 552 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 PUS10Q3MIT2 529 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 WDR44Q5JSH3 913 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 SCARA5Q6ZMJ2 495 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 CCDC149Q6ZUS6 474 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 DCP1BQ8IZD4 617 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 SMRP1Q8NCR6 262 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 OR6B3Q8NGW1 331 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 PGLYRP2Q96PD5 576 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 ACBD6Q9BR61 282 aa16.47■□□□□ 0.23
IFT20-208ENST00000578985 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
IFT20-208ENST00000578985 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms