RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 SEC16BQ96JE7 1060 aa18.6■□□□□ 0.57
ERBB2-205ENST00000578199 PRMT1Q99873 361 aaKnown RBP18.6■□□□□ 0.57
ERBB2-205ENST00000578199 RNPEPQ9H4A4 650 aa18.6■□□□□ 0.57
ERBB2-205ENST00000578199 IP6K2Q9UHH9 426 aa18.6■□□□□ 0.57
ERBB2-205ENST00000578199 CENPFP49454 3210 aa18.6■□□□□ 0.57
ERBB2-205ENST00000578199 A0A0G2JMZ2 1700 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 AGTP01019 485 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 CXCL8P10145 99 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 ASPAP45381 313 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 IFNAR2P48551 515 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 DNAJC24Q6P3W2 148 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 TRMT10CQ7L0Y3 403 aaKnown RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 EXOC3L1Q86VI1 746 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 ATXN2LQ8WWM7 1075 aaKnown RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 KAT2BQ92831 832 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 FAM167AQ96KS9 214 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 FHDC1Q9C0D6 1143 aaPredicted RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 XYLT2Q9H1B5 865 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 DNPEPQ9ULA0 475 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 IGKV6-21A0A0C4DH24 114 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 SRRM3A6NNA2 597 aaPredicted RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 KRT1P04264 644 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 TXNP10599 105 aaKnown RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 C6orf89Q6UWU4 347 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 JPH2Q9BR39 696 aaPredicted RBP18.59■□□□□ 0.57
ERBB2-205ENST00000578199 FAM129AQ9BZQ8 928 aa18.59■□□□□ 0.57
ERBB2-205ENST00000578199 TCRBV5S1A1TA0A578 114 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 GOLGA8SH3BPF8 625 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 DRD4P21917 467 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 LRRC14Q15048 493 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 IZUMO3Q5VZ72 239 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 DENND1BQ6P3S1 775 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 MPZL3Q6UWV2 235 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 C9orf72Q96LT7 481 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 SLITRK1Q96PX8 696 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 TRAIPQ9BWF2 469 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 PTPRHQ9HD43 1115 aa18.58■□□□□ 0.57
ERBB2-205ENST00000578199 LGR5O75473 907 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 TTC4O95801 387 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 CD19P15391 556 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 IREB2P48200 963 aaKnown RBP18.58■□□□□ 0.56
ERBB2-205ENST00000578199 KCTD2Q14681 263 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 SPRED3Q2MJR0 410 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 P3H1Q32P28 736 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 HP1BP3Q5SSJ5 553 aaPredicted RBP18.58■□□□□ 0.56
ERBB2-205ENST00000578199 FBXW10Q5XX13 1052 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 MICALCLQ6ZW33 695 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 ERICH1Q86X53 443 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 TMEM35BQ8NCS4 154 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 MGARPQ8TDB4 240 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 CHMP6Q96FZ7 201 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 MMP19Q99542 508 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 TMEM109Q9BVC6 243 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
ERBB2-205ENST00000578199 INTS9Q9NV88 658 aaKnown RBP18.58■□□□□ 0.56
ERBB2-205ENST00000578199 NINJ2Q9NZG7 142 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 SAE1Q9UBE0 346 aaPredicted RBP18.58■□□□□ 0.56
ERBB2-205ENST00000578199 TBK1Q9UHD2 729 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 CYTH4Q9UIA0 394 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.56
ERBB2-205ENST00000578199 MAN1A1P33908 653 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 AP3M2P53677 418 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 ADCY1Q08828 1119 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-205ENST00000578199 TNFAIP8L3Q5GJ75 292 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 TSHZ1Q6ZSZ6 1077 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 CABS1Q96KC9 395 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 MLXIPLQ9NP71 852 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 CAPN7Q9Y6W3 813 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 ACKR2O00590 384 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 PROZP22891 400 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 CDR1P51861 262 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 SMTNL2Q2TAL5 461 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 CCDC62Q6P9F0 684 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 SYDE1Q6ZW31 735 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-205ENST00000578199 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 ZNF317Q96PQ6 595 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-205ENST00000578199 FZD8Q9H461 694 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 C10orf88Q9H8K7 445 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 ZNF148Q9UQR1 794 aa18.57■□□□□ 0.56
ERBB2-205ENST00000578199 GPR25O00155 361 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 CALB1P05937 261 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 CETPP11597 493 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 KLRC2P26717 231 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 RFC1P35251 1148 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-205ENST00000578199 LACTBP83111 547 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-205ENST00000578199 GRM1Q13255 1194 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 KCNT1Q5JUK3 1230 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 CYP4X1Q8N118 509 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 CDT1Q9H211 546 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 AGTPBP1Q9UPW5 1226 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 LIASO43766 372 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 TNNC2P02585 160 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 NFICP08651 508 aa18.56■□□□□ 0.56
ERBB2-205ENST00000578199 PTPN20Q4JDL3 420 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms