RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 REXO1Q8N1G1 1221 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SMG8Q8ND04 991 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 CMASQ8NFW8 434 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SMG7Q92540 1137 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RUBCNQ92622 972 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RABGGTAQ92696 567 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 SLC5A5Q92911 643 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 FGF14Q92915 247 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 PHKBQ93100 1093 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 FAM167AQ96KS9 214 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 NLRP4Q96MN2 994 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 IFT122Q9HBG6 1241 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 WDR6Q9NNW5 1121 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 PARD6AQ9NPB6 346 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 DISC1Q9NRI5 854 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 TBC1D22BQ9NU19 505 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 AGPAT5Q9NUQ2 364 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RBM28Q9NW13 759 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 MIOSQ9NXC5 875 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 DACT1Q9NYF0 836 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 KIAA1522Q9P206 1035 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 BAHCC1Q9P281 2608 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 IGSF9Q9P2J2 1179 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 WRAP73Q9P2S5 460 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 EPS15L1Q9UBC2 864 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 WNT16Q9UBV4 365 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 RALYQ9UKM9 306 aaKnown RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 MTF2Q9Y483 593 aaPredicted RBP4.42□□□□□ -1.7
PTPRM-206ENST00000578093 HES2Q9Y543 173 aa4.42□□□□□ -1.7
PTPRM-206ENST00000578093 NID2Q14112 1375 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GREB1Q4ZG55 1949 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CEP295Q9C0D2 2601 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ESYT2A0FGR8 921 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SHISA7A6NL88 538 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ANHXE9PGG2 379 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ENC1O14682 589 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TGM5O43548 720 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ZNF623O75123 536 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 MAFO75444 373 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PSMD10O75832 226 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PAPLNO95428 1278 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GLUD1P00367 558 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 URODP06132 367 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RPL17P18621 184 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CD72P21854 359 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TGM1P22735 817 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SFPQP23246 707 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ARNTP27540 789 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 COL8A1P27658 744 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TMOD1P28289 359 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 HOXA11P31270 313 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CIITAP33076 1130 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 MLH1P40692 756 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 OR1G1P47890 313 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GLUD2P49448 558 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SCNN1GP51170 649 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ATXN1P54253 815 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 NPEPPSP55786 919 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RPS26P62854 115 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 EXOSC10Q01780 885 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 DSC1Q08554 894 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SNW1Q13573 536 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GIT2Q14161 759 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RTP2Q5QGT7 225 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 LRCH2Q5VUJ6 765 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 HGSNATQ68CP4 663 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 DCLRE1AQ6PJP8 1040 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TSSK4Q6SA08 328 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PARM1Q6UWI2 310 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 FAM43BQ6ZT52 329 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ANO5Q75V66 913 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CATSPER4Q7RTX7 472 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 MRPL10Q7Z7H8 261 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ZNF410Q86VK4 478 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PPFIBP1Q86W92 1011 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PALB2Q86YC2 1186 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 COLGALT2Q8IYK4 626 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TMTC2Q8N394 836 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ZNF713Q8N859 430 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 URGCPQ8TCY9 931 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RNF34Q969K3 372 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RPS6KC1Q96S38 1066 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 PAAF1Q9BRP4 392 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TMEM175Q9BSA9 504 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TEKT3Q9BXF9 490 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 EIF2AQ9BY44 585 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GCOM2Q9BZD3 368 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 GPR62Q9BZJ7 368 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 ZMYND12Q9H0C1 365 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RSAD1Q9HA92 442 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RXFP1Q9HBX9 757 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CBX8Q9HC52 389 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CHST12Q9NRB3 414 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 MRPL17Q9NRX2 175 aaKnown RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 RAD18Q9NS91 495 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 VPS54Q9P1Q0 977 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 SUCLA2Q9P2R7 463 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-206ENST00000578093 TCEAL9Q9UHQ7 104 aa4.41□□□□□ -1.7
PTPRM-206ENST00000578093 CYP8B1Q9UNU6 501 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms