RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 MAP2K7O14733 419 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 WDR47O94967 919 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TTC33Q6PID6 262 aaPredicted RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 C16orf86Q6ZW13 317 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TMA16Q96EY4 203 aaKnown RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 GCNAQ96QF7 691 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 JPH1Q9HDC5 661 aaPredicted RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 LBRQ14739 615 aaKnown RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 WDR72Q3MJ13 1102 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 RRM2BQ7LG56 351 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 LDHDQ86WU2 507 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 CATSPER3Q86XQ3 398 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 PTPRN2Q92932 1015 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 CENPTQ96BT3 561 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 C20orf96Q9NUD7 363 aaPredicted RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 ALKQ9UM73 1620 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 INO80Q9ULG1 1556 aaPredicted RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TIMM44O43615 452 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 SNUPNO95149 360 aaKnown RBP11.21□□□□□ -0.61
SEC22B-201ENST00000578049 HMOX2P30519 316 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 ATICP31939 592 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 CCNG2Q16589 344 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 GPR141Q7Z602 305 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TASP1Q9H6P5 420 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 HEY2Q9UBP5 337 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 TAGLN3Q9UI15 199 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 KIAA1257Q9ULG3 409 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 SHOC2Q9UQ13 582 aa11.21□□□□□ -0.61
SEC22B-201ENST00000578049 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 AIM2O14862 343 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 ZBTB22O15209 634 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 ATP6V1G2O95670 118 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 TNFRSF8P28908 595 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 MAP3K7CLP57077 242 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 GRM1Q13255 1194 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF235Q14590 738 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 HABP4Q5JVS0 413 aaKnown RBP11.21□□□□□ -0.62
SEC22B-201ENST00000578049 IRGCQ6NXR0 463 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 SAR1AQ9NR31 198 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 PSMA4P25789 261 aaKnown RBP11.21□□□□□ -0.62
SEC22B-201ENST00000578049 FAM32AQ9Y421 112 aaKnown RBP11.21□□□□□ -0.62
SEC22B-201ENST00000578049 NBPF26B4DH59 902 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 F8VZ95 297 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 PJA2O43164 708 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 ENTPD3O75355 529 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 PRKCBP05771 671 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 CLK1P49759 484 aaKnown RBP11.21□□□□□ -0.62
SEC22B-201ENST00000578049 CHI3L2Q15782 390 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 NBPF15Q8N660 670 aa11.21□□□□□ -0.62
SEC22B-201ENST00000578049 AENQ8WTP8 325 aaKnown RBP11.21□□□□□ -0.62
SEC22B-201ENST00000578049 GAS2O43903 313 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 TBX2Q13207 712 aaPredicted RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 PTK2BQ14289 1009 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 TMPRSS6Q8IU80 811 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 EXD1Q8NHP7 514 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 RMDN1Q96DB5 314 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 DDX50Q9BQ39 737 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 OLA1Q9NTK5 396 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 RGL1Q9NZL6 768 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CDV3Q9UKY7 258 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 LMTK2Q8IWU2 1503 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 EXTL3O43909 919 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 UBTFL6P0CB48 400 aaPredicted RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 HADHAP40939 763 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 KCNK10P57789 538 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 RFX8Q6ZV50 586 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CD302Q8IX05 232 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 TAGAPQ8N103 731 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 FBXO25Q8TCJ0 367 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 FNDC3AQ9Y2H6 1198 aaKnown RBP11.2□□□□□ -0.62
SEC22B-201ENST00000578049 C15orf41Q9Y2V0 281 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 CDC42BPAQ5VT25 1732 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 RASSF9O75901 435 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 PSMC3P17980 439 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 SYCP2LQ5T4T6 812 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 MDM1Q8TC05 714 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 MCEEQ96PE7 176 aa11.2□□□□□ -0.62
SEC22B-201ENST00000578049 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms