RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 C12orf56Q8IXR9 622 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 ELMOD1Q8N336 334 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 ATAD1Q8NBU5 361 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 TMEM174Q8WUU8 243 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 ING5Q8WYH8 240 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 TCEAL4Q96EI5 215 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 ZNF512Q96ME7 567 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 GDAP2Q9NXN4 497 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 USP25Q9UHP3 1055 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 SIX4Q9UIU6 781 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 ASB3Q9Y575 518 aa13.42□□□□□ -0.26
CSNK1D-206ENST00000577578 PTPRJQ12913 1337 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 KLRC4O43908 158 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 MYL1P05976 194 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 PFKFB1P16118 471 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 GPC5P78333 572 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 SCARA3Q6AZY7 606 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 METTL23Q86XA0 190 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 TMC8Q8IU68 726 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 WDR49Q8IV35 697 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 HS6ST3Q8IZP7 471 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 TTC9BQ8N6N2 239 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 FLCNQ8NFG4 579 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 ST13P5Q8NFI4 369 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 ELSPBP1Q96BH3 223 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 MCRS1Q96EZ8 462 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 CHAMP1Q96JM3 812 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 SPATA32Q96LK8 384 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 MTMR12Q9C0I1 747 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 IRF2BPLQ9H1B7 796 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 TRPV4Q9HBA0 871 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 ARHGEF3Q9NR81 526 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 CGNQ9P2M7 1197 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 SERTAD1Q9UHV2 236 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 AGAP1Q9UPQ3 857 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 NUP210Q8TEM1 1887 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 COL4A2P08572 1712 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 WDR87Q6ZQQ6 2873 aa13.41□□□□□ -0.26
CSNK1D-206ENST00000577578 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 PI15O43692 258 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 AFMP43652 599 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 ALDH1A3P47895 512 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 TUFMP49411 452 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 EPHB3P54753 998 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 STARD6P59095 220 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 RBP5P82980 135 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 KNOP1Q1ED39 458 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 FAM78AQ5JUQ0 283 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 HS2ST1Q7LGA3 356 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 LIMS2Q7Z4I7 341 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 LRRTM3Q86VH5 581 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 TMEM86AQ8N2M4 240 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 CSGALNACT2Q8N6G5 542 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 OR5B17Q8NGF7 314 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 SPPL2BQ8TCT7 592 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 FAM84AQ96KN4 292 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 ASB16Q96NS5 453 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 KXD1Q9BQD3 176 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 GPR88Q9GZN0 384 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 CA14Q9ULX7 337 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 L1RE1Q9UN81 338 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 ATP6V1DQ9Y5K8 247 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 OBSL1O75147 1896 aa13.4□□□□□ -0.26
CSNK1D-206ENST00000577578 PTPRDP23468 1912 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 CACNA1IQ9P0X4 2223 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 A0A1W2PQ27 194 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 A0A1W2PQ64 194 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 A0A1W2PQD8 194 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 GABRDO14764 452 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 TMEM191BP0C7N4 346 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 ATF6P18850 670 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 PFKPQ01813 784 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 STK4Q13043 487 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 PSMD2Q13200 908 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 PSMD6Q15008 389 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 DUOXA2Q1HG44 320 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 SLC39A12Q504Y0 691 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 TANGO2Q6ICL3 276 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 DPH6Q7L8W6 267 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 DNAJB7Q7Z6W7 309 aaPredicted RBP13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 GRAMD1CQ8IYS0 662 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
CSNK1D-206ENST00000577578 XXYLT1Q8NBI6 393 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms