RNA–Protein interactions for RNA: ENST00000576069.5

SPNS3-206, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-206ENST00000576069 HNRNPA1P09651 372 aaKnown RBP eCLIP20.82■□□□□ 0.92
SPNS3-206ENST00000576069 HOXA9P31269 272 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 ELF1P32519 619 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 NCOA4Q13772 614 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 CBX2Q14781 532 aaPredicted RBP20.82■□□□□ 0.92
SPNS3-206ENST00000576069 TCEAL8Q8IYN2 117 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 PRKD2Q9BZL6 878 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 XYLT2Q9H1B5 865 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 CTNND2Q9UQB3 1225 aa20.82■□□□□ 0.92
SPNS3-206ENST00000576069 STX10O60499 249 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 CPB1P15086 417 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 LHX1P48742 406 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 MYL6P60660 151 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 SOWAHAQ2M3V2 549 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 SGSM1Q2NKQ1 1148 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 RTP3Q9BQQ7 232 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 PHF7Q9BWX1 381 aaPredicted RBP20.81■□□□□ 0.92
SPNS3-206ENST00000576069 ZCWPW1Q9H0M4 648 aa20.81■□□□□ 0.92
SPNS3-206ENST00000576069 METTL14Q9HCE5 456 aaKnown RBP20.81■□□□□ 0.92
SPNS3-206ENST00000576069 PLXNA3P51805 1871 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 GABRDO14764 452 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 VNN1O95497 513 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 POU2F2P09086 479 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 TRIM49P0CI25 452 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 TRIM49CP0CI26 452 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 PPP3CAQ08209 521 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 SMARCB1Q12824 385 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 WDR72Q3MJ13 1102 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 PPM1LQ5SGD2 360 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 RNF19BQ6ZMZ0 732 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 FRMD5Q7Z6J6 570 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 ADHFE1Q8IWW8 467 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 OR10T2Q8NGX3 314 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 SLC7A14Q8TBB6 771 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 TAF4BQ92750 862 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 ZNF707Q96C28 371 aaPredicted RBP20.8■□□□□ 0.92
SPNS3-206ENST00000576069 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
SPNS3-206ENST00000576069 ACBD6Q9BR61 282 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 TMEM8AQ9HCN3 771 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 ARMCX3Q9UH62 379 aaPredicted RBP20.8■□□□□ 0.92
SPNS3-206ENST00000576069 RWDD2AQ9UIY3 292 aa20.8■□□□□ 0.92
SPNS3-206ENST00000576069 TACC1O75410 805 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 FGFR1OPO95684 399 aaKnown RBP20.79■□□□□ 0.92
SPNS3-206ENST00000576069 GCLMP48507 274 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 STX17P56962 302 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 NLRP12P59046 1061 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 MYL7Q01449 175 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 ADCY1Q08828 1119 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 KRT39Q6A163 491 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 RBM43Q6ZSC3 357 aaKnown RBP20.79■□□□□ 0.92
SPNS3-206ENST00000576069 ADGRF2Q8IZF7 708 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 TMEM209Q96SK2 561 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 MMS19Q96T76 1030 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 CYP4F11Q9HBI6 524 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 DDX43Q9NXZ2 648 aaKnown RBP20.79■□□□□ 0.92
SPNS3-206ENST00000576069 HSFX1Q9UBD0 423 aa20.79■□□□□ 0.92
SPNS3-206ENST00000576069 PRRG1O14668 218 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 XYLBO75191 536 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 SEC24AO95486 1093 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 GNA14O95837 355 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 WEE2P0C1S8 567 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 OR4Q2P0C623 313 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 WARSP23381 471 aaKnown RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 TNNC1P63316 161 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 ZP2Q05996 745 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 ZNF699Q32M78 642 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 CT47A1Q5JQC4 288 aaPredicted RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 DCP1BQ8IZD4 617 aaKnown RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 C2orf15Q8WU43 125 aaKnown RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 SMG7Q92540 1137 aaKnown RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 COL25A1Q9BXS0 654 aaPredicted RBP20.78■□□□□ 0.92
SPNS3-206ENST00000576069 POMKQ9H5K3 350 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 DACH1Q9UI36 760 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 CDH22Q9UJ99 828 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 C5orf42Q9H799 3197 aa20.78■□□□□ 0.92
SPNS3-206ENST00000576069 MTCL1Q9Y4B5 1905 aaKnown RBP20.77■□□□□ 0.92
SPNS3-206ENST00000576069 C19orf67A6NJJ6 358 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 HLA-DRAP01903 254 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 P4HA1P13674 534 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 PCSK1P29120 753 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 TSPY1Q01534 308 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 SLC39A12Q504Y0 691 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 ZNF667Q5HYK9 610 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 OSTM1Q86WC4 334 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 KBTBD7Q8WVZ9 684 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 SRRTQ9BXP5 876 aaKnown RBP20.77■□□□□ 0.92
SPNS3-206ENST00000576069 PIDD1Q9HB75 910 aa20.77■□□□□ 0.92
SPNS3-206ENST00000576069 WDR6Q9NNW5 1121 aaKnown RBP20.77■□□□□ 0.92
SPNS3-206ENST00000576069 NXF1Q9UBU9 619 aaKnown RBP20.77■□□□□ 0.92
SPNS3-206ENST00000576069 MTMR11A4FU01 709 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 VNN2O95498 520 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 ASS1P00966 412 aaKnown RBP20.76■□□□□ 0.91
SPNS3-206ENST00000576069 LRG1P02750 347 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 GNL1P36915 607 aaPredicted RBP20.76■□□□□ 0.91
SPNS3-206ENST00000576069 PIK3CAP42336 1068 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 TCERG1LQ5VWI1 586 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 LRRTM3Q86VH5 581 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 FEZF2Q8TBJ5 459 aa20.76■□□□□ 0.91
SPNS3-206ENST00000576069 TAS1R2Q8TE23 839 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms