RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CXCL12P48061 93 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 KPNA1P52294 538 aaPredicted RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ARHGAP8P85298 464 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 GTF2BQ00403 316 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ARHGAP29Q52LW3 1261 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ARHGAP15Q53QZ3 475 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 LAIR1Q6GTX8 287 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 GAREM2Q75VX8 874 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 DNAJB7Q7Z6W7 309 aaPredicted RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 LARP4BQ92615 738 aaKnown RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 RAD54LQ92698 747 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 GCNAQ96QF7 691 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
TVP23B-208ENST00000575261 MKNK1Q9BUB5 465 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 ASB7Q9H672 318 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 OBP2AQ9NY56 170 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 TCHHQ07283 1943 aa11.31□□□□□ -0.6
TVP23B-208ENST00000575261 KIF26AQ9ULI4 1882 aaPredicted RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ANO9A1A5B4 782 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 MYBPHLA2RUH7 354 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SPECC1L-ADORA2AF8WAN1 911 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 PIRO00625 290 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SOAT2O75908 522 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 CDC25CP30307 473 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 NMT1P30419 496 aaKnown RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 CTHP32929 405 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 TUFMP49411 452 aaKnown RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 MCM2P49736 904 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ACOT2P49753 483 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SATB1Q01826 763 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 GAS6Q14393 721 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 MCM6Q14566 821 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ADALQ6DHV7 355 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SLFN12LQ6IEE8 588 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 RALGPS2Q86X27 583 aaPredicted RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 METTL23Q86XA0 190 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SPEM1Q8N4L4 309 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 CELF5Q8N6W0 485 aaKnown RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 C2orf15Q8WU43 125 aaKnown RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 FIZ1Q96SL8 496 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ST6GALNAC4Q9H4F1 302 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SCN1AP35498 2009 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 SPTBN2O15020 2390 aa11.3□□□□□ -0.6
TVP23B-208ENST00000575261 EPG5Q9HCE0 2579 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 LRP3O75074 770 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 ATF6P18850 670 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 WEE1P30291 646 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 SOX9P48436 509 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 TAF6P49848 677 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 POU5F1Q01860 360 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 SMARCB1Q12824 385 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 TAF12Q16514 161 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 LPAL2Q16609 132 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 DGKKQ5KSL6 1271 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 LARP1BQ659C4 914 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 PRR23BQ6ZRT6 265 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 THEM5Q8N1Q8 247 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 BPIFB1Q8TDL5 484 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 ZFYVE19Q96K21 471 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 TASP1Q9H6P5 420 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 ZMYM5Q9UJ78 669 aa11.29□□□□□ -0.6
TVP23B-208ENST00000575261 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
TVP23B-208ENST00000575261 TISP43B9A030 160 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 ANKRD63C9JTQ0 380 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CYB561D2O14569 222 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 IL18RAPO95256 599 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 RETP07949 1114 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 TGM1P22735 817 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CNR2P34972 360 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CYP4F8P98187 520 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 GRIN1Q05586 938 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 SPEM2Q0P670 501 aa11.28□□□□□ -0.6
TVP23B-208ENST00000575261 CCINQ13939 588 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms