RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 MSCO60682 206 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 FARP2O94887 1054 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 GH1P01241 217 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 GCAP28676 217 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MYL6P60660 151 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 NOL9Q5SY16 702 aaKnown RBP9.46□□□□□ -0.9
NCBP3-204ENST00000574911 SMYD5Q6GMV2 418 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 DNAJC24Q6P3W2 148 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 WDTC1Q8N5D0 677 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 NIPA2Q8N8Q9 360 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MAGEB18Q96M61 343 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 CFAP57Q96MR6 1250 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MCEEQ96PE7 176 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 IMPG2Q9BZV3 1241 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 MLXIPLQ9NP71 852 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 TBK1Q9UHD2 729 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
NCBP3-204ENST00000574911 hCG_1818297A0A087WSY0 165 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 F8VP50 259 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SUN1O94901 812 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ZSCAN5DPP0CG00 497 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 BRD2P25440 801 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 NF2P35240 595 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TAP1Q03518 808 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 OASLQ15646 514 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ANGEL2Q5VTE6 544 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 NUGGCQ68CJ6 796 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TXNRD3NBQ6F5E7 133 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ARHGEF18Q6ZSZ5 1173 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TDRPQ86YL5 185 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 APOBEC3FQ8IUX4 373 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CCDC63Q8NA47 563 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 GDAP1Q8TB36 358 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 PRPF31Q8WWY3 499 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TTC25Q96NG3 672 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ACO2Q99798 780 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 MRPL4Q9BYD3 311 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 MTMR12Q9C0I1 747 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SAYSD1Q9NPB0 183 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 DDX56Q9NY93 547 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 AGAP1Q9UPQ3 857 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CFAP73A6NFT4 308 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 FZD9O00144 591 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ABLIM1O14639 778 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TOM1L1O75674 476 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 UBOX5O94941 541 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ETS1P14921 441 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 EDNRBP24530 442 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 STX2P32856 288 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ARSEP51690 589 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 STAT5BP51692 787 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 PIGHQ14442 188 aaPredicted RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 FAM133BQ5BKY9 247 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 FAM160B1Q5W0V3 765 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CDCA2Q69YH5 1023 aaPredicted RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CGB2Q6NT52 195 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 PPP1R21Q6ZMI0 780 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SPATA21Q7Z572 469 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ZBTB33Q86T24 672 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SRRM1Q8IYB3 904 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ANKRD35Q8N283 1001 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 NKD2Q969F2 451 aaPredicted RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 NKIRAS1Q9NYS0 192 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 CPSF3Q9UKF6 684 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 ZNF148Q9UQR1 794 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
NCBP3-204ENST00000574911 MYH9P35579 1960 aaKnown RBP9.45□□□□□ -0.9
NCBP3-204ENST00000574911 SSC5DA1L4H1 1573 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 ITGAVP06756 1048 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 ATF7P17544 494 aaPredicted RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 CDKN2BP42772 138 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 EFNA5P52803 228 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 VCPP55072 806 aaKnown RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 PDE4CQ08493 712 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 NR1H3Q13133 447 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 MORF4L2Q15014 288 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 SURF1Q15526 300 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 DUOXA2Q1HG44 320 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 TFDP3Q5H9I0 405 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 RNASEH2BQ5TBB1 312 aaKnown RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 IER5Q5VY09 327 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 CYP4F22Q6NT55 531 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 GPAT2Q6NUI2 795 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 DCUN1D2Q6PH85 259 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 TFAP2BQ92481 460 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 PLCD4Q9BRC7 762 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms