RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 BACE2Q9Y5Z0 518 aa18.29■□□□□ 0.52
NUP88-210ENST00000574867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.28■□□□□ 0.52
NUP88-210ENST00000574867 A0A1W2PQC6 194 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 C2CD2LO14523 706 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 GABRDO14764 452 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 YWHAEP62258 255 aaKnown RBP18.28■□□□□ 0.52
NUP88-210ENST00000574867 NR1I3Q14994 352 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 SYCP1Q15431 976 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 PLPP4Q5VZY2 271 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 ENOSF1Q7L5Y1 443 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 THEM5Q8N1Q8 247 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 MICAL1Q8TDZ2 1067 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 KBTBD7Q8WVZ9 684 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 IFNKQ9P0W0 207 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 FNIP2Q9P278 1114 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 SIK3Q9Y2K2 1263 aa18.28■□□□□ 0.52
NUP88-210ENST00000574867 RFXAPO00287 272 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 CA8P35219 290 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 INCA1Q0VD86 236 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 CTXN3Q4LDR2 81 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 SMYD5Q6GMV2 418 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 MRPL43Q8N983 215 aaKnown RBP18.27■□□□□ 0.52
NUP88-210ENST00000574867 JAKMIP2Q96AA8 810 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
NUP88-210ENST00000574867 SNX25Q9H3E2 840 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 RXFP1Q9HBX9 757 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 SIX2Q9NPC8 291 aa18.27■□□□□ 0.52
NUP88-210ENST00000574867 OR6C75A6NL08 312 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 TEX33O43247 280 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 LILRB3O75022 631 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 CXCL14O95715 111 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 PCSK1P29120 753 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 FXR1P51114 621 aaKnown RBP eCLIP18.27■□□□□ 0.51
NUP88-210ENST00000574867 PRSS55Q6UWB4 352 aaPredicted RBP18.27■□□□□ 0.51
NUP88-210ENST00000574867 ARHGEF19Q8IW93 802 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 AUTS2Q8WXX7 1259 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 MRPL45Q9BRJ2 306 aaKnown RBP18.27■□□□□ 0.51
NUP88-210ENST00000574867 EMILIN2Q9BXX0 1053 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 SDCBP2Q9H190 292 aa18.27■□□□□ 0.51
NUP88-210ENST00000574867 DDX43Q9NXZ2 648 aaKnown RBP18.27■□□□□ 0.51
NUP88-210ENST00000574867 C2orf71A6NGG8 1288 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 IRS1P35568 1242 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 RAP1GAPP47736 663 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 NDUFV1P49821 464 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 MFAP3P55082 362 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 PPP2R3CQ969Q6 453 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 PCMTD1Q96MG8 357 aaPredicted RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 GAS2L1Q99501 681 aaPredicted RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 ARID3AQ99856 593 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 XPO4Q9C0E2 1151 aaKnown RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 DNAI2Q9GZS0 605 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 TBC1D4O60343 1298 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 CSPG5O95196 566 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 POU3F3P20264 500 aaPredicted RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 CDH8P55286 799 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 KLHDC7AQ5VTJ3 777 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 SLC8B1Q6J4K2 584 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 UNC93AQ86WB7 457 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 OSTM1Q86WC4 334 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 OR6B3Q8NGW1 331 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 ACBD6Q9BR61 282 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 UBE2TQ9NPD8 197 aaPredicted RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 CISHQ9NSE2 258 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 FBXL5Q9UKA1 691 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 BARX2Q9UMQ3 279 aaPredicted RBP18.26■□□□□ 0.51
NUP88-210ENST00000574867 STXBP5LQ9Y2K9 1186 aa18.26■□□□□ 0.51
NUP88-210ENST00000574867 TRIM21P19474 475 aaKnown RBP18.25■□□□□ 0.51
NUP88-210ENST00000574867 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
NUP88-210ENST00000574867 PLCB2Q00722 1185 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 RRAGAQ7L523 313 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 FAM161BQ96MY7 647 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 RTP3Q9BQQ7 232 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 FAM207AQ9NSI2 230 aaPredicted RBP18.25■□□□□ 0.51
NUP88-210ENST00000574867 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 TRANK1O15050 2925 aa18.25■□□□□ 0.51
NUP88-210ENST00000574867 HIDE1A8MVS5 230 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 ADH1AP07327 375 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 UCHL3P15374 230 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 CD58P19256 250 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 TSPY1Q01534 308 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 GANQ9H2C0 597 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 NSUN3Q9H649 340 aaKnown RBP18.24■□□□□ 0.51
NUP88-210ENST00000574867 CDH9Q9ULB4 789 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 FSD2A1L4K1 749 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 A8MXQ7 604 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 TEX28O15482 410 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 CILPO75339 1184 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 CNPP09543 421 aaKnown RBP18.24■□□□□ 0.51
NUP88-210ENST00000574867 KLK7P49862 253 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 APBA1Q02410 837 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 DEFB123Q8N688 67 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 UBR7Q8N806 425 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
NUP88-210ENST00000574867 KREMEN1Q96MU8 473 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms