RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CCDC89Q8N998 374 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF564Q8TBZ8 553 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SIKE1Q9BRV8 207 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 NUP85Q9BW27 656 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PSTPIP2Q9H939 334 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PCYOX1Q9UHG3 505 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 GOLGA8SH3BPF8 625 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 GOLGA8MH3BSY2 632 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SMAPO00193 183 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 GSC2O15499 205 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ZSCAN9O15535 394 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 USP1O94782 785 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 VCAM1P19320 739 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 RPA3P35244 121 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PRKCIP41743 596 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PTGIRP43119 386 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 MAGEA4P43358 317 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ADARP55265 1226 aaKnown RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 WDR4P57081 412 aaKnown RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ASPHQ12797 758 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 GSTA3Q16772 222 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SLC45A4Q5BKX6 768 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PPM1KQ8N3J5 372 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 TTLL6Q8N841 843 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 BBOF1Q8ND07 529 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 LENG1Q96BZ8 264 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SLC7A6OSQ96CW6 309 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 WDR18Q9BV38 432 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 FBXO6Q9NRD1 293 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-212ENST00000574799 ARL8BQ9NVJ2 186 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 TMOD2Q9NZR1 351 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 PRR12Q9ULL5 1215 aa10.1□□□□□ -0.79
CCDC40-212ENST00000574799 SPECC1L-ADORA2AF8WAN1 911 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 WNT10BO00744 389 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 EDF1O60869 148 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 EYA4O95677 639 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 KITP10721 976 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 KRT4P19013 534 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 MAN1A1P33908 653 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CXCL9Q07325 125 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 SFSWAPQ12872 951 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 PKN2Q16513 984 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 RABGAP1LQ5R372 815 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 GRAMD4Q6IC98 578 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 KLC3Q6P597 504 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 PPP2R3CQ969Q6 453 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 NR1H4Q96RI1 486 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 TSSK1BQ9BXA7 367 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 STK33Q9BYT3 514 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 WRAP73Q9P2S5 460 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 TMX2Q9Y320 296 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CEP350Q5VT06 3117 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 ZNFX1Q9P2E3 1918 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 STK10O94804 968 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 MAPK4P31152 587 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 TRIP10Q15642 601 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 OTOAQ7RTW8 1153 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CATSPER2Q96P56 530 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 SAR1AQ9NR31 198 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 STK32BQ9NY57 414 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 WHRNQ9P202 907 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 STX18Q9P2W9 335 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 KRT5P13647 590 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CDK7P50613 346 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 GALK1P51570 392 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CAV1Q03135 178 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 CGB2Q6NT52 195 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 ZBED8Q8IZ13 594 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 SLC20A1Q8WUM9 679 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 FAM151AQ8WW52 585 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF75CPQ92670 426 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 ANO3Q9BYT9 981 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 IL1RAPL1Q9NZN1 696 aa10.09□□□□□ -0.79
CCDC40-212ENST00000574799 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.09□□□□□ -0.79
CCDC40-212ENST00000574799 PIK3CDO00329 1044 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 TBC1D12O60347 775 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ATF7P17544 494 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 HOXA7P31268 230 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 SREBF1P36956 1147 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 CASP5P51878 434 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 FOXB2Q5VYV0 432 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 B3GNT9Q6UX72 402 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 STXBP4Q6ZWJ1 553 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 NAT14Q8WUY8 206 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ECSITQ9BQ95 431 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ZBTB21Q9ULJ3 1066 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 RPL26L1Q9UNX3 145 aaKnown RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 EML1O00423 815 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 CCDC92Q53HC0 331 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 CC2D2BQ6DHV5 1058 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ZC3H3Q8IXZ2 948 aaKnown RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ARL10Q8N8L6 244 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 INTS2Q9H0H0 1204 aaKnown RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 CYP4F11Q9HBI6 524 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms