RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DCUN1D2Q6PH85 259 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 SH2D3CQ8N5H7 860 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 OR2W6PQ8NHA6 318 aa14.9□□□□□ -0.02
VPS33B-208ENST00000574755 A0A1B0GUA9 196 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 TMEM191CA6NGB0 347 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 DYNC1LI2O43237 492 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-208ENST00000574755 MED7O43513 233 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 FGFR4P22455 802 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 GBP1P32455 592 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 CDH5P33151 784 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-208ENST00000574755 MAN1A1P33908 653 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 KIZQ2M2Z5 673 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ILDR2Q71H61 639 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ZNF410Q86VK4 478 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 WDTC1Q8N5D0 677 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ACAP3Q96P50 834 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 SMYD3Q9H7B4 428 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 GRHL1Q9NZI5 618 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 PARP2Q9UGN5 583 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 PRDM4Q9UKN5 801 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 PPFIA2O75334 1257 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 RALAP11233 206 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 POLR2BP30876 1174 aaKnown RBP14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ATICP31939 592 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ACTN2P35609 894 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 TMEM62Q0P6H9 643 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ORC1Q13415 861 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 PRAMEF19Q5SWL8 479 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ZFYVE27Q5T4F4 411 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ZDHHC24Q6UX98 284 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 KATNAL2Q8IYT4 538 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ATG4AQ8WYN0 398 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 FAXDC2Q96IV6 333 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 HERPUD2Q9BSE4 406 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 HEMGNQ9BXL5 484 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 FAM49AQ9H0Q0 323 aaPredicted RBP14.89□□□□□ -0.03
VPS33B-208ENST00000574755 SDCBP2Q9H190 292 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 CENPHQ9H3R5 247 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 CHST7Q9NS84 486 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 DOCK3Q8IZD9 2030 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 ZNF236Q9UL36 1845 aa14.89□□□□□ -0.03
VPS33B-208ENST00000574755 H0YGN5 161 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 MYZAPP0CAP1 466 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 P4HA1P13674 534 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 RAD23BP54727 409 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 DENND1BQ6P3S1 775 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 MTRF1LQ9UGC7 380 aaKnown RBP14.88□□□□□ -0.03
VPS33B-208ENST00000574755 AGAP1Q9UPQ3 857 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 TCRBV5S1A1TA0A578 114 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 RRN3P2A6NIE6 340 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 PAEPP09466 180 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 TAP1Q03518 808 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 KRT17Q04695 432 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 ZNF844Q08AG5 666 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 SMYD5Q6GMV2 418 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 C3orf20Q8ND61 904 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 EXD1Q8NHP7 514 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 PPP1R13LQ8WUF5 828 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 HPDLQ96IR7 371 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 ATP6V1G3Q96LB4 118 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 OSBPL8Q9BZF1 889 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 HMGXB4Q9UGU5 601 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
VPS33B-208ENST00000574755 ZNF252P-AS1Q0IIN9 211 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 ZSCAN26Q16670 478 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 SLCO2A1Q92959 643 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 TWNKQ96RR1 684 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 TXLNGYQ9BZA5 131 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 LHX5Q9H2C1 402 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 VRTNQ9H8Y1 702 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 DPP3Q9NY33 737 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 ITGA11Q9UKX5 1188 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 C2CD2Q9Y426 696 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 A6NJR5 290 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 HMGB1P1B2RPK0 211 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-208ENST00000574755 F8VP50 259 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 CILPO75339 1184 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 PMS2P54278 862 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 HUNKP57058 714 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 PTPN11Q06124 597 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-208ENST00000574755 CALCOCO2Q13137 446 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 KLF1Q13351 362 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-208ENST00000574755 PTPN20Q4JDL3 420 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 SLC4A11Q8NBS3 891 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-208ENST00000574755 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 TMEM176AQ96HP8 235 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 CCDC114Q96M63 670 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 CAPS2Q9BXY5 557 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 TMBIM4Q9HC24 238 aa14.87□□□□□ -0.03
VPS33B-208ENST00000574755 TRIP11Q15643 1979 aa14.86□□□□□ -0.03
VPS33B-208ENST00000574755 NRCAMQ92823 1304 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms