RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 FAM26FQ5R3K3 315 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 CYP4A22Q5TCH4 519 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 IQCEQ6IPM2 695 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 EPM2AIP1Q7L775 607 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-214ENST00000574003 OSTM1Q86WC4 334 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 TMC8Q8IU68 726 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 GPD1LQ8N335 351 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 ELMOD1Q8N336 334 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 OR5B17Q8NGF7 314 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 KCNG4Q8TDN1 519 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 GIPC2Q8TF65 315 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 SCFD1Q8WVM8 642 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 RSPRY1Q96DX4 576 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 ZCWPW1Q9H0M4 648 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 TMLHEQ9NVH6 421 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 SIX4Q9UIU6 781 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 L1RE1Q9UN81 338 aa12.22□□□□□ -0.45
RPAIN-214ENST00000574003 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
RPAIN-214ENST00000574003 A0A1B0GVL5 298 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 KPNA7A9QM74 516 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 TGFB1I1O43294 461 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 KRT19P08727 400 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 ATF6P18850 670 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 ACAT1P24752 427 aaKnown RBP12.21□□□□□ -0.45
RPAIN-214ENST00000574003 CYP2J2P51589 502 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 SLC44A4Q53GD3 710 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 SDHAF4Q5VUM1 108 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 UNC13DQ70J99 1090 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 DNAJB7Q7Z6W7 309 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-214ENST00000574003 CCDC105Q8IYK2 499 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 PDCL2Q8N4E4 241 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 CSGALNACT2Q8N6G5 542 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 DTWD2Q8NBA8 298 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 ZNF507Q8TCN5 953 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 SEPT5Q99719 369 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-214ENST00000574003 PRRX2Q99811 253 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 CUEDC2Q9H467 287 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 TMEM206Q9H813 350 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
RPAIN-214ENST00000574003 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-214ENST00000574003 ZNF197O14709 1029 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ECI2O75521 394 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 LDHAP00338 332 aaKnown RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 EPHB3P54753 998 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 EPHA5P54756 1037 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 CYP4F8P98187 520 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 AMPD3Q01432 767 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 POU5F1Q01860 360 aaKnown RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 EHHADHQ08426 723 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 MLF2Q15773 248 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 MGAT5BQ3V5L5 792 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 SV2CQ496J9 727 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 VITQ6UXI7 678 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 GAREM2Q75VX8 874 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 METTL23Q86XA0 190 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ZNF560Q96MR9 790 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ASB16Q96NS5 453 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 PI4K2AQ9BTU6 479 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 LRRC27Q9C0I9 530 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 SLITRK6Q9H5Y7 841 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 HEBP1Q9NRV9 189 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 AGPAT3Q9NRZ7 376 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 ABI2Q9NYB9 513 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-214ENST00000574003 SNX9Q9Y5X1 595 aa12.2□□□□□ -0.46
RPAIN-214ENST00000574003 SHISA7A6NL88 538 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPAIN-214ENST00000574003 KLRC4O43908 158 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 TMEM191BP0C7N4 346 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 DLATP10515 647 aaKnown RBP12.19□□□□□ -0.46
RPAIN-214ENST00000574003 PFKFB1P16118 471 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 GABRR2P28476 465 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 STARD6P59095 220 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 PLD1Q13393 1074 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 UBXN2BQ14CS0 331 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 ANGPT1Q15389 498 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 CNNM4Q6P4Q7 775 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 FRMD5Q7Z6J6 570 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 NT5DC4Q86YG4 428 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 THEM5Q8N1Q8 247 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 CACTINQ8WUQ7 758 aaKnown RBP12.19□□□□□ -0.46
RPAIN-214ENST00000574003 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 ELSPBP1Q96BH3 223 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 ELMO3Q96BJ8 720 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 MKNK1Q9BUB5 465 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 SMG9Q9H0W8 520 aaKnown RBP12.19□□□□□ -0.46
RPAIN-214ENST00000574003 ATXN3LQ9H3M9 355 aa12.19□□□□□ -0.46
RPAIN-214ENST00000574003 ZFP14Q9HCL3 533 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms