RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 LPIN3Q9BQK8 851 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 ZCWPW1Q9H0M4 648 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 ZHX3Q9H4I2 956 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 PARD6AQ9NPB6 346 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 RBM12Q9NTZ6 932 aaKnown RBP23.81■■□□□ 1.4
SNF8-216ENST00000573795 HSFX1Q9UBD0 423 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 SMC3Q9UQE7 1217 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 STYXL1Q9Y6J8 313 aa23.81■■□□□ 1.4
SNF8-216ENST00000573795 PRAMEF12O95522 483 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 KRT18P05783 430 aaKnown RBP23.8■■□□□ 1.4
SNF8-216ENST00000573795 ATF6P18850 670 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 GABRR2P28476 465 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 CCR3P51677 355 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 ARMCX5Q6P1M9 558 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 YAF2Q8IY57 180 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 CSGALNACT1Q8TDX6 532 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 LARP4BQ92615 738 aaKnown RBP23.8■■□□□ 1.4
SNF8-216ENST00000573795 MSANTD3Q96H12 275 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 ZFYVE19Q96K21 471 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 ATXN3LQ9H3M9 355 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 ST6GALNAC4Q9H4F1 302 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 ASB7Q9H672 318 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 IL21Q9HBE4 155 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 C2CD2Q9Y426 696 aa23.8■■□□□ 1.4
SNF8-216ENST00000573795 OBSL1O75147 1896 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 MYBPHLA2RUH7 354 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 TBCAO75347 108 aaKnown RBP23.79■■□□□ 1.4
SNF8-216ENST00000573795 PAX3P23760 479 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 DMWDQ09019 674 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 SF3A1Q15459 793 aaKnown RBP23.79■■□□□ 1.4
SNF8-216ENST00000573795 SLC39A12Q504Y0 691 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 GPR158Q5T848 1215 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 LARP1BQ659C4 914 aaKnown RBP23.79■■□□□ 1.4
SNF8-216ENST00000573795 CRELD2Q6UXH1 353 aaPredicted RBP23.79■■□□□ 1.4
SNF8-216ENST00000573795 USP49Q70CQ1 688 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 EFCAB13Q8IY85 973 aa23.79■■□□□ 1.4
SNF8-216ENST00000573795 SPTBN2O15020 2390 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 BMP15O95972 392 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 CTHP32929 405 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 NRLP54845 237 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 CYP4F8P98187 520 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 ADALQ6DHV7 355 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 Q6ZS52 159 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 BRAPQ7Z569 592 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 LRRTM3Q86VH5 581 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 GPR161Q8N6U8 529 aaKnown RBP23.78■■□□□ 1.4
SNF8-216ENST00000573795 SEPT5Q99719 369 aaPredicted RBP23.78■■□□□ 1.4
SNF8-216ENST00000573795 CCSER1Q9C0I3 900 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 C8orf33Q9H7E9 229 aaPredicted RBP23.78■■□□□ 1.4
SNF8-216ENST00000573795 C2orf42Q9NWW7 574 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 OBP2AQ9NY56 170 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 GTSE1Q9NYZ3 720 aa23.78■■□□□ 1.4
SNF8-216ENST00000573795 SPECC1L-ADORA2AF8WAN1 911 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 PPP1R37O75864 691 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 WEE1P30291 646 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 ADSSP30520 456 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 CXCL12P48061 93 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 KPNA1P52294 538 aaPredicted RBP23.77■■□□□ 1.4
SNF8-216ENST00000573795 WNT7BP56706 349 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 LPAL2Q16609 132 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 ITIH5Q86UX2 942 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 SPEM1Q8N4L4 309 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 TTC8Q8TAM2 541 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 EPSTI1Q96J88 318 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 STRA6Q9BX79 667 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 DPP3Q9NY33 737 aa23.77■■□□□ 1.4
SNF8-216ENST00000573795 AGO2Q9UKV8 859 aaKnown RBP23.77■■□□□ 1.4
SNF8-216ENST00000573795 K7ESF4 209 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 CYB561D2O14569 222 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 PAPSS2O95340 614 aaPredicted RBP23.76■■□□□ 1.39
SNF8-216ENST00000573795 FGF19O95750 216 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 HOXC13P31276 330 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 ABCD1P33897 745 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 DDIT3P35638 169 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 TAF6P49848 677 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 PPP2R5DQ14738 602 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 MGAT5BQ3V5L5 792 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 ARHGAP29Q52LW3 1261 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 WSCD1Q658N2 575 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 C1orf228Q6PIY5 440 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 ZNF720Q7Z2F6 126 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 SFR1Q86XK3 245 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 RASSF8Q8NHQ8 419 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 SECISBP2LQ93073 1101 aaKnown RBP23.76■■□□□ 1.39
SNF8-216ENST00000573795 PYM1Q9BRP8 204 aaKnown RBP23.76■■□□□ 1.39
SNF8-216ENST00000573795 TASP1Q9H6P5 420 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 DSEQ9UL01 958 aa23.76■■□□□ 1.39
SNF8-216ENST00000573795 TUFMP49411 452 aaKnown RBP23.75■■□□□ 1.39
SNF8-216ENST00000573795 MCM2P49736 904 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 ATXN1P54253 815 aaKnown RBP23.75■■□□□ 1.39
SNF8-216ENST00000573795 TNK2Q07912 1038 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 LRRC32Q14392 662 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 PTPAQ15257 358 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 SLFN12LQ6IEE8 588 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 RALGPS2Q86X27 583 aaPredicted RBP23.75■■□□□ 1.39
SNF8-216ENST00000573795 CELF5Q8N6W0 485 aaKnown RBP23.75■■□□□ 1.39
SNF8-216ENST00000573795 SMG9Q9H0W8 520 aaKnown RBP23.75■■□□□ 1.39
SNF8-216ENST00000573795 GMEB2Q9UKD1 530 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 USP18Q9UMW8 372 aa23.75■■□□□ 1.39
SNF8-216ENST00000573795 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms