RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 RDH13Q8NBN7 331 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 RTP3Q9BQQ7 232 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 ZCWPW1Q9H0M4 648 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 IRF2BPLQ9H1B7 796 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 SLITRK6Q9H5Y7 841 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
NPLOC4-213ENST00000573519 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 A0A1W2PRU2 124 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 CLIC2O15247 247 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 HUS1O60921 280 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 ECI2O75521 394 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 MICAL2O94851 1124 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 TNNC2P02585 160 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 HOXD13P35453 343 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 CYP2J2P51589 502 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 RBP5P82980 135 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 TEAD2Q15562 447 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 TANGO2Q6ICL3 276 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 POTEHQ6S545 545 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 EPM2AIP1Q7L775 607 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 LEMD2Q8NC56 503 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 BORCS6Q96GS4 357 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 ZSWIM3Q96MP5 696 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 PLA2G2FQ9BZM2 168 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 GDPD2Q9HCC8 539 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 ZFP14Q9HCL3 533 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 AGPAT3Q9NRZ7 376 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 ABI2Q9NYB9 513 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 TSC2P49815 1807 aa13.68□□□□□ -0.22
NPLOC4-213ENST00000573519 UBE4BO95155 1302 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 WDFY4Q6ZS81 3184 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 NRG2O14511 850 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SLFN14P0C7P3 912 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 PFKFB1P16118 471 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 TSPY1Q01534 308 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 PFKPQ01813 784 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 GRM2Q14416 872 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 VEPH1Q14D04 833 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SURF1Q15526 300 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 TAF12Q16514 161 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 DCP1BQ8IZD4 617 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 PDCL2Q8N4E4 241 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SHKBP1Q8TBC3 707 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SCFD1Q8WVM8 642 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 ELSPBP1Q96BH3 223 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SHDQ96IW2 340 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 DNAJC25Q9H1X3 360 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 KIAA1586Q9HCI6 787 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SIT1Q9Y3P8 196 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 ZNF318Q5VUA4 2279 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
NPLOC4-213ENST00000573519 PTPRJQ12913 1337 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 MOSPD3O75425 235 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DCNP07585 359 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 TNNI1P19237 187 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 EPHA5P54756 1037 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 MYL7Q01449 175 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 EHHADHQ08426 723 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 SNRNP35Q16560 246 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DUOXA2Q1HG44 320 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DNAJB7Q7Z6W7 309 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 LRRTM3Q86VH5 581 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 TMC8Q8IU68 726 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 CCDC105Q8IYK2 499 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 DTWD2Q8NBA8 298 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 OR5B17Q8NGF7 314 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ZSCAN18Q8TBC5 510 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 SPPL2BQ8TCT7 592 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 GIPC2Q8TF65 315 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 PSMG2Q969U7 264 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 PAGE5Q96GU1 130 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 ASB16Q96NS5 453 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 FNBP1Q96RU3 617 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
NPLOC4-213ENST00000573519 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms