RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 L1RE1Q9UN81 338 aa18.69■□□□□ 0.58
SMG6-212ENST00000573153 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 KPNA7A9QM74 516 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 CYB561D2O14569 222 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ECI2O75521 394 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ITGB3P05106 788 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 GLULP15104 373 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 POLR2BP30876 1174 aaKnown RBP18.68■□□□□ 0.58
SMG6-212ENST00000573153 KRT85P78386 507 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 CCDC142Q17RM4 750 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 FAM78AQ5JUQ0 283 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 LMBRD2Q68DH5 695 aaPredicted RBP18.68■□□□□ 0.58
SMG6-212ENST00000573153 PHLDB3Q6NSJ2 640 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ARMCX5Q6P1M9 558 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ALYREFQ86V81 257 aaKnown RBP18.68■□□□□ 0.58
SMG6-212ENST00000573153 OSTM1Q86WC4 334 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 CCDC105Q8IYK2 499 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 FLCNQ8NFG4 579 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 RSPRY1Q96DX4 576 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ASB16Q96NS5 453 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 MTMR12Q9C0I1 747 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 TBC1D17Q9HA65 648 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 AGPAT3Q9NRZ7 376 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 FAM86C1Q9NVL1 165 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 HSPBP1Q9NZL4 362 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 HSFX1Q9UBD0 423 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 SLC27A5Q9Y2P5 690 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 UBE4BO95155 1302 aa18.68■□□□□ 0.58
SMG6-212ENST00000573153 PVALEFA0A1B0GWK0 134 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 SLFN14P0C7P3 912 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 CMA1P23946 247 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 CDR1P51861 262 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 STARD6P59095 220 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 TFAMQ00059 246 aaKnown RBP18.67■□□□□ 0.58
SMG6-212ENST00000573153 GAREM2Q75VX8 874 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 USP37Q86T82 979 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 SYCP3Q8IZU3 236 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 LRRC52Q8N7C0 313 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 KIAA0895Q8NCT3 520 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 IL21Q9HBE4 155 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 USP25Q9UHP3 1055 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 SERTAD1Q9UHV2 236 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 FBXL21Q9UKT6 434 aa18.67■□□□□ 0.58
SMG6-212ENST00000573153 H0Y858 1186 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 HCRTO43612 131 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 LRRN2O75325 713 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 MRE11P49959 708 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 PDZD4Q76G19 769 aaPredicted RBP18.66■□□□□ 0.58
SMG6-212ENST00000573153 PLEKHO2Q8TD55 490 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 ELSPBP1Q96BH3 223 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 SPATA32Q96LK8 384 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 MFSD1Q9H3U5 465 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 TRPV4Q9HBA0 871 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 INTS13Q9NVM9 706 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 GDAP2Q9NXN4 497 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 DSEQ9UL01 958 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 AGAP1Q9UPQ3 857 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 NME7Q9Y5B8 376 aa18.66■□□□□ 0.58
SMG6-212ENST00000573153 KIF26AQ9ULI4 1882 aaPredicted RBP18.65■□□□□ 0.58
SMG6-212ENST00000573153 GABRDO14764 452 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 PFKFB1P16118 471 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 AFMP43652 599 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 SNRPFP62306 86 aaKnown RBP18.65■□□□□ 0.58
SMG6-212ENST00000573153 TEAD2Q15562 447 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 SV2CQ496J9 727 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 SLC39A12Q504Y0 691 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 STXBP5Q5T5C0 1151 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 C12orf56Q8IXR9 622 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 ZNF687Q8N1G0 1237 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 PSMG2Q969U7 264 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 ZNF560Q96MR9 790 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 LPIN3Q9BQK8 851 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 FOXQ1Q9C009 403 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 SCAND2PQ9GZW5 306 aaPredicted RBP18.65■□□□□ 0.58
SMG6-212ENST00000573153 ASAH2Q9NR71 780 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 ITGA11Q9UKX5 1188 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 VPS13AQ96RL7 3174 aa18.65■□□□□ 0.58
SMG6-212ENST00000573153 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 ARNTLO00327 626 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 ZNF197O14709 1029 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 MYL1P05976 194 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 MYL4P12829 197 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 PNPLA4P41247 253 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 STK4Q13043 487 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 FZD5Q13467 585 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 BECN1Q14457 450 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 VITQ6UXI7 678 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 DNAJB7Q7Z6W7 309 aaPredicted RBP18.64■□□□□ 0.57
SMG6-212ENST00000573153 TMEM150AQ86TG1 271 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 NELFCDQ8IXH7 590 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 CEP57L1Q8IYX8 460 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 LEMD2Q8NC56 503 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 KBTBD7Q8WVZ9 684 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 ZNF516Q92618 1163 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 PAGE5Q96GU1 130 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 ZNF512Q96ME7 567 aaPredicted RBP18.64■□□□□ 0.57
SMG6-212ENST00000573153 SLC39A2Q9NP94 309 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 MTF2Q9Y483 593 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms