RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.28
TSR1-202ENST00000571806 PTPAQ15257 358 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 DGKKQ5KSL6 1271 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 LARP1BQ659C4 914 aaKnown RBP16.83■□□□□ 0.28
TSR1-202ENST00000571806 NT5DC4Q86YG4 428 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 THEM5Q8N1Q8 247 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 KRI1Q8N9T8 703 aaKnown RBP16.83■□□□□ 0.28
TSR1-202ENST00000571806 ATAD1Q8NBU5 361 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 FAM200AQ8TCP9 573 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 RAD54LQ92698 747 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 ATXN3LQ9H3M9 355 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 BLOC1S4Q9NUP1 217 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 SLC27A5Q9Y2P5 690 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 CACNA1AO00555 2505 aa16.83■□□□□ 0.28
TSR1-202ENST00000571806 MYBPHLA2RUH7 354 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 LRP3O75074 770 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 PAPSS2O95340 614 aaPredicted RBP16.82■□□□□ 0.28
TSR1-202ENST00000571806 CDC25CP30307 473 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 DDIT3P35638 169 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 POSTNQ15063 836 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 ADALQ6DHV7 355 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 LAIR1Q6GTX8 287 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 SYNPOQ8N3V7 929 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 SPPL2BQ8TCT7 592 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 LARP4BQ92615 738 aaKnown RBP16.82■□□□□ 0.28
TSR1-202ENST00000571806 HVCN1Q96D96 273 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 GCNAQ96QF7 691 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 CRISPLD1Q9H336 500 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 THG1LQ9NWX6 298 aaKnown RBP16.82■□□□□ 0.28
TSR1-202ENST00000571806 STYXL1Q9Y6J8 313 aa16.82■□□□□ 0.28
TSR1-202ENST00000571806 PLCG1P19174 1290 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 GABRR2P28476 465 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 TAF6P49848 677 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 MCM6Q14566 821 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 TAF12Q16514 161 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 GPR158Q5T848 1215 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 GAREM2Q75VX8 874 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 ZCWPW1Q9H0M4 648 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 TASP1Q9H6P5 420 aa16.81■□□□□ 0.28
TSR1-202ENST00000571806 AGO2Q9UKV8 859 aaKnown RBP16.81■□□□□ 0.28
TSR1-202ENST00000571806 CDV3Q9UKY7 258 aaKnown RBP16.81■□□□□ 0.28
TSR1-202ENST00000571806 NUP210Q8TEM1 1887 aaPredicted RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 MED19A0JLT2 244 aaPredicted RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 SOBPA7XYQ1 873 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 SPECC1L-ADORA2AF8WAN1 911 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 CYB561D2O14569 222 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 PPEF2O14830 753 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 FOXD2O60548 495 aaPredicted RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 NFICP08651 508 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 ACOT2P49753 483 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 KARSQ15046 597 aaKnown RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 MGAT5BQ3V5L5 792 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 SLC39A12Q504Y0 691 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 SLC39A4Q6P5W5 647 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 DCP1BQ8IZD4 617 aaKnown RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 OR10T2Q8NGX3 314 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 BPIFB1Q8TDL5 484 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 FIZ1Q96SL8 496 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 SEPT5Q99719 369 aaPredicted RBP16.8■□□□□ 0.28
TSR1-202ENST00000571806 RTKNQ9BST9 563 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 MKNK1Q9BUB5 465 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
TSR1-202ENST00000571806 NCANO14594 1321 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 IL18RAPO95256 599 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 RETP07949 1114 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 DDX6P26196 483 aaKnown RBP eCLIP16.79■□□□□ 0.28
TSR1-202ENST00000571806 NMT1P30419 496 aaKnown RBP16.79■□□□□ 0.28
TSR1-202ENST00000571806 HOXA6P31267 233 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 CTHP32929 405 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 PNPLA4P41247 253 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
TSR1-202ENST00000571806 SV2CQ496J9 727 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 ZNF720Q7Z2F6 126 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 LONP2Q86WA8 852 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 RSPRY1Q96DX4 576 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 TMEM209Q96SK2 561 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 PYM1Q9BRP8 204 aaKnown RBP16.79■□□□□ 0.28
TSR1-202ENST00000571806 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 CCDC39Q9UFE4 941 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 EXOC7Q9UPT5 735 aa16.79■□□□□ 0.28
TSR1-202ENST00000571806 KPNA7A9QM74 516 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 ANKRD63C9JTQ0 380 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 LDHAP00338 332 aaKnown RBP16.78■□□□□ 0.28
TSR1-202ENST00000571806 TGM1P22735 817 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 ATXN1P54253 815 aaKnown RBP16.78■□□□□ 0.28
TSR1-202ENST00000571806 AMPD2Q01433 879 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 SATB1Q01826 763 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
TSR1-202ENST00000571806 STXBP5Q5T5C0 1151 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 LRRC15Q8TF66 581 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 POMGNT1Q8WZA1 660 aa16.78■□□□□ 0.28
TSR1-202ENST00000571806 F5P12259 2224 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms