RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 SLC39A12Q504Y0 691 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ADALQ6DHV7 355 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ARMCX5Q6P1M9 558 aa19■□□□□ 0.63
CIITA-206ENST00000571190 TXNDC11Q6PKC3 985 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ZNF720Q7Z2F6 126 aa19■□□□□ 0.63
CIITA-206ENST00000571190 DGLUCYQ7Z3D6 616 aa19■□□□□ 0.63
CIITA-206ENST00000571190 SFR1Q86XK3 245 aa19■□□□□ 0.63
CIITA-206ENST00000571190 EFCAB13Q8IY85 973 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ATXN3LQ9H3M9 355 aa19■□□□□ 0.63
CIITA-206ENST00000571190 NCDNQ9UBB6 729 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ZSCAN21Q9Y5A6 473 aaPredicted RBP19■□□□□ 0.63
CIITA-206ENST00000571190 CLIC4Q9Y696 253 aa19■□□□□ 0.63
CIITA-206ENST00000571190 TRIP11Q15643 1979 aa19■□□□□ 0.63
CIITA-206ENST00000571190 SLC38A8A6NNN8 435 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 CYB561D2O14569 222 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 PRAMEF12O95522 483 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 WNT7BP56706 349 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 SATB1Q01826 763 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 RSPO4Q2I0M5 234 aaPredicted RBP18.99■□□□□ 0.63
CIITA-206ENST00000571190 GPR158Q5T848 1215 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 DYMQ7RTS9 669 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 RASSF8Q8NHQ8 419 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 IER2Q9BTL4 223 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 RBM12Q9NTZ6 932 aaKnown RBP18.99■□□□□ 0.63
CIITA-206ENST00000571190 DPP3Q9NY33 737 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 AGO2Q9UKV8 859 aaKnown RBP18.99■□□□□ 0.63
CIITA-206ENST00000571190 COL4A2P08572 1712 aa18.99■□□□□ 0.63
CIITA-206ENST00000571190 MYBPHLA2RUH7 354 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 ABCD1P33897 745 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 CCR3P51677 355 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 CYP4F8P98187 520 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 POU5F1Q01860 360 aaKnown RBP18.98■□□□□ 0.63
CIITA-206ENST00000571190 KCNA1Q09470 495 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 WSCD1Q658N2 575 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 SCARA3Q6AZY7 606 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 SLFN12LQ6IEE8 588 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 YAF2Q8IY57 180 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 ZSWIM2Q8NEG5 633 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 TTC8Q8TAM2 541 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 CSGALNACT1Q8TDX6 532 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 SEPT5Q99719 369 aaPredicted RBP18.98■□□□□ 0.63
CIITA-206ENST00000571190 PYM1Q9BRP8 204 aaKnown RBP18.98■□□□□ 0.63
CIITA-206ENST00000571190 C8orf33Q9H7E9 229 aaPredicted RBP18.98■□□□□ 0.63
CIITA-206ENST00000571190 OBP2AQ9NY56 170 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 GTSE1Q9NYZ3 720 aa18.98■□□□□ 0.63
CIITA-206ENST00000571190 FBXO2Q9UK22 296 aaPredicted RBP18.98■□□□□ 0.63
CIITA-206ENST00000571190 MYMKA6NI61 221 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 SPECC1L-ADORA2AF8WAN1 911 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 WEE1P30291 646 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 HOXC13P31276 330 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 TUFMP49411 452 aaKnown RBP18.97■□□□□ 0.63
CIITA-206ENST00000571190 TAF6P49848 677 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 KPNA1P52294 538 aaPredicted RBP18.97■□□□□ 0.63
CIITA-206ENST00000571190 DMWDQ09019 674 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 CUL4AQ13619 759 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 MGAT5BQ3V5L5 792 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 Q6ZS52 159 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 ITIH5Q86UX2 942 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
CIITA-206ENST00000571190 DNAJC19Q96DA6 116 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 MSANTD3Q96H12 275 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 SLC46A2Q9BY10 475 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 TASP1Q9H6P5 420 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 PARD6AQ9NPB6 346 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 C2orf42Q9NWW7 574 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 DSEQ9UL01 958 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 CACNA1AO00555 2505 aa18.97■□□□□ 0.63
CIITA-206ENST00000571190 FGF19O95750 216 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 HAPLN1P10915 354 aaPredicted RBP18.96■□□□□ 0.63
CIITA-206ENST00000571190 CTHP32929 405 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 CXCL12P48061 93 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 NRLP54845 237 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 TNK2Q07912 1038 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 FAM173BQ6P4H8 233 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 TMEM150AQ86TG1 271 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 SPEM1Q8N4L4 309 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 GIPC2Q8TF65 315 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 HVCN1Q96D96 273 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 CLIC6Q96NY7 704 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 TMLHEQ9NVH6 421 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 DMXL1Q9Y485 3027 aa18.96■□□□□ 0.63
CIITA-206ENST00000571190 PATJQ8NI35 1801 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 KPNA7A9QM74 516 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 K7ESF4 209 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 HMGA1P17096 107 aaKnown RBP18.95■□□□□ 0.62
CIITA-206ENST00000571190 LPAL2Q16609 132 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 ARHGAP29Q52LW3 1261 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 ARHGAP15Q53QZ3 475 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 RALGPS2Q86X27 583 aaPredicted RBP18.95■□□□□ 0.62
CIITA-206ENST00000571190 METTL23Q86XA0 190 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 GPR161Q8N6U8 529 aaKnown RBP18.95■□□□□ 0.62
CIITA-206ENST00000571190 CXorf38Q8TB03 319 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 FAM200AQ8TCP9 573 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 BPIFB1Q8TDL5 484 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 SMG9Q9H0W8 520 aaKnown RBP18.95■□□□□ 0.62
CIITA-206ENST00000571190 STK17AQ9UEE5 414 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 SRPRBQ9Y5M8 271 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms