RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RWDD3Q9Y3V2 267 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 INSL6Q9Y581 213 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 FHOD1Q9Y613 1164 aa7.05□□□□□ -1.28
CTDNEP1-204ENST00000570484 ANO9A1A5B4 782 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRRC53A6NM62 1247 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 F8VZ95 297 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 H0YGN5 161 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM189-UBE2V1I3L0A0 370 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PIRO00625 290 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PPEF2O14830 753 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 GPR37L1O60883 481 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 TADA2AO75478 443 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 GYPCP04921 128 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ALDH2P05091 517 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 CA8P35219 290 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 KRT9P35527 623 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PBX1P40424 430 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ASPAP45381 313 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 SLC11A1P49279 550 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PDE6CP51160 858 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 AFF1P51825 1210 aaKnown RBP7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZBED6P86452 979 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 APBA1Q02410 837 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 DSC1Q08554 894 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 KCNMA1Q12791 1236 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 NAB2Q15742 525 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 UPP1Q16831 310 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 SFMBT2Q5VUG0 894 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 DCLRE1AQ6PJP8 1040 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 C16orf59Q7L2K0 433 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 VPS36Q86VN1 386 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF280BQ86YH2 543 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ARHGEF19Q8IW93 802 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 COLGALT2Q8IYK4 626 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 LRRN4Q8WUT4 740 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 VWCEQ96DN2 955 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 TRIM44Q96DX7 344 aaPredicted RBP7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 RAD9AQ99638 391 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 EDEM3Q9BZQ6 932 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 XYLT2Q9H1B5 865 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 CXCL16Q9H2A7 254 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 SNX25Q9H3E2 840 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 DEF6Q9H4E7 631 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 FAM124BQ9H5Z6 455 aaPredicted RBP7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 SMYD3Q9H7B4 428 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 NRDE2Q9H7Z3 1164 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 VRTNQ9H8Y1 702 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 CYP3A43Q9HB55 503 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 APOBEC3GQ9HC16 384 aaKnown RBP7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 MIOSQ9NXC5 875 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PLA2G2EQ9NZK7 142 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 CACNG4Q9UBN1 327 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 DNAJB4Q9UDY4 337 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 STK39Q9UEW8 545 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 ADAM28Q9UKQ2 775 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 MYO6Q9UM54 1294 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 PCDHB12Q9Y5F1 795 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 EVPLQ92817 2033 aa7.04□□□□□ -1.28
CTDNEP1-204ENST00000570484 CYB561D2O14569 222 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 NRP1O14786 923 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 EPHB6O15197 1021 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 DDHD2O94830 711 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 IPO7O95373 1038 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 S1PR4O95977 384 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CST3P01034 146 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 URODP06132 367 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 FERP16591 822 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PCSK1P29120 753 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CTNNB1P35222 781 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 SOX5P35711 763 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PBX3P40426 434 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 RAP1GAPP47736 663 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 FXR1P51114 621 aaKnown RBP eCLIP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 BCAR1P56945 870 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 BPIFB4P59827 614 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 LILRA4P59901 499 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 MLLT1Q03111 559 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ARID5AQ03989 594 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 BMS1Q14692 1282 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 DRAP1Q14919 205 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 RAB30Q15771 203 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 C9orf50Q5SZB4 431 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 ZNF280DQ6N043 979 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 KIAA1841Q6NSI8 718 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PHLDB3Q6NSJ2 640 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 FUT10Q6P4F1 479 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 PDXDC1Q6P996 788 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 GJB7Q6PEY0 223 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM270Q6UE05 265 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 KCNT2Q6UVM3 1135 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 CRIPAKQ8N1N5 446 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 TMEM86AQ8N2M4 240 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 TOP6BLQ8N6T0 577 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 COLGALT1Q8NBJ5 622 aa7.03□□□□□ -1.28
CTDNEP1-204ENST00000570484 RBBP8NLQ8NC74 664 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms