RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ADAM29Q9UKF5 820 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PCDHGB3Q9Y5G1 929 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 PRG4Q92954 1404 aaPredicted RBP4.44□□□□□ -1.7
UBR1-211ENST00000569971 CROCC2H7BZ55 1655 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ABCA8O94911 1581 aa4.44□□□□□ -1.7
UBR1-211ENST00000569971 ADGRL2O95490 1459 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 GPATCH8Q9UKJ3 1502 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 hCG_1642624A0A1W2PR95 340 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 BTN3A1O00481 513 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 ADAMTS3O15072 1205 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 KIAA0391O15091 583 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 TBC1D4O60343 1298 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 WDHD1O75717 1129 aaPredicted RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 RENBPP51606 427 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 ADAM8P78325 824 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 PUM3Q15397 648 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 CDSNQ15517 529 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 PABPC1LQ4VXU2 614 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 HS1BP3Q53T59 392 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 CCDC93Q567U6 631 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 ZMAT1Q5H9K5 638 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 EMC10Q5UCC4 262 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 SYTL1Q8IYJ3 562 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 CMTM4Q8IZR5 234 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 MYCT1Q8N699 235 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 PCSK9Q8NBP7 692 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 GIMAP8Q8ND71 665 aaPredicted RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 OR10H5Q8NGA6 315 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 SLC35B2Q8TB61 432 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 ATXN2LQ8WWM7 1075 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 CCT6BQ92526 530 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 MAML1Q92585 1016 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 TMEM41AQ96HV5 264 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 MRI1Q9BV20 369 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 COLEC11Q9BWP8 271 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 TTLL2Q9BWV7 592 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 DPH1Q9BZG8 443 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 UBA5Q9GZZ9 404 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 ENKD1Q9H0I2 346 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 SMURF2Q9HAU4 748 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 PRDM16Q9HAZ2 1276 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 GNL3LQ9NVN8 582 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 AFF4Q9UHB7 1163 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 CEP83Q9Y592 693 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 RPRD2Q5VT52 1461 aaKnown RBP4.43□□□□□ -1.7
UBR1-211ENST00000569971 SHANK2Q9UPX8 1470 aa4.43□□□□□ -1.7
UBR1-211ENST00000569971 KDM5BQ9UGL1 1544 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 A0A1W2PPC4 97 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 TRIM43BA6NCK2 446 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 OVOL3O00110 214 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 NRP1O14786 923 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 TEX33O43247 280 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 EIF5BO60841 1220 aaKnown RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 SLC43A1O75387 559 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 GJB1P08034 283 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 SLC6A4P31645 630 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 EPHB4P54760 987 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 NPEPPSP55786 919 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 CTBP1Q13363 440 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 MRPL49Q13405 166 aaKnown RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 KIF22Q14807 665 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 STARD3Q14849 445 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 RALBP1Q15311 655 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 NCOA1Q15788 1441 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 ATP2B3Q16720 1220 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 MPEG1Q2M385 716 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 CCDC38Q502W7 563 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 SLFN13Q68D06 897 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 OTUD7BQ6GQQ9 843 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 PGBD2Q6P3X8 592 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZNF783Q6ZMS7 281 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 CIR1Q86X95 450 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 Q8N1X5 172 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 TXLNBQ8N3L3 684 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZNF527Q8NB42 609 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 SH3RF3Q8TEJ3 882 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZNF566Q969W8 418 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 TRIM43Q96BQ3 446 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 NMD3Q96D46 503 aaKnown RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZC3H10Q96K80 434 aaKnown RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 NDC1Q9BTX1 674 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 BRIP1Q9BX63 1249 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 MAF1Q9H063 256 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 KLC2Q9H0B6 622 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 DEF6Q9H4E7 631 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 BRD9Q9H8M2 597 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 CD248Q9HCU0 757 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZDHHC8Q9ULC8 765 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 SLC45A2Q9UMX9 530 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 MAGED2Q9UNF1 606 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 MED16Q9Y2X0 877 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 DGKBQ9Y6T7 804 aa4.42□□□□□ -1.7
UBR1-211ENST00000569971 ZNF644Q9H582 1327 aaPredicted RBP4.42□□□□□ -1.7
UBR1-211ENST00000569971 ANKRD30BQ9BXX2 1392 aa4.41□□□□□ -1.7
UBR1-211ENST00000569971 CDC42BPAQ5VT25 1732 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms