RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PCBP1Q15365 356 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG1-217ENST00000569764 FBXW10Q5XX13 1052 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 HEATR6Q6AI08 1181 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 MFSD5Q6N075 450 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PLBD1Q6P4A8 553 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SPERTQ8NA61 448 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DNAJB8Q8NHS0 232 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 CDCA3Q99618 268 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 MYLK2Q9H1R3 596 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DZANK1Q9NVP4 752 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 FAM196BA6NMK8 535 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 WDR64B1ANS9 1081 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 UBXN8O00124 270 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 TNFRSF21O75509 655 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PF4V1P10720 104 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ADSLP30566 484 aaPredicted RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 BMP8BP34820 402 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PTGS2P35354 604 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 PLD1Q13393 1074 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DUSP28Q4G0W2 176 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 FAM47AQ5JRC9 791 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SPDYCQ5MJ68 293 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 THNSL2Q86YJ6 484 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 DYNLL2Q96FJ2 89 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ZNF558Q96NG5 402 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 HERC2P3Q9BVR0 1158 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ELAC1Q9H777 363 aaKnown RBP7.05□□□□□ -1.28
SMG1-217ENST00000569764 CRLF2Q9HC73 371 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 SIRPGQ9P1W8 387 aa7.05□□□□□ -1.28
SMG1-217ENST00000569764 ZMYM6O95789 1325 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 CDH23Q9H251 3354 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 C17orf113A0A1B0GUU1 675 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 MYO1CO00159 1063 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 APBB3O95704 486 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 POLBP06746 335 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 P4HA1P13674 534 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 DAB2P98082 770 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 MPP1Q00013 466 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 TERF2Q15554 542 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TCEA2Q15560 299 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SLC35G1Q2M3R5 365 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SLC6A19Q695T7 634 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TWF2Q6IBS0 349 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 SLC39A5Q6ZMH5 540 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SPATA2LQ8IUW3 424 aaPredicted RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 PASD1Q8IV76 773 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 RNF139Q8WU17 664 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TBCBQ99426 244 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 LLPHQ9BRT6 129 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 ZNF700Q9H0M5 742 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 HAUS2Q9NVX0 235 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 ZMYM2Q9UBW7 1377 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 CTAGE9A4FU28 777 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 CAPN14A8MX76 684 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SGK1O00141 431 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 BRINP1O60477 761 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TSC22D2O75157 780 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TBX18O95935 607 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 NR2C2P49116 596 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 PLCD1P51178 756 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 NRLP54845 237 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 GOLGA8FQ08AF8 430 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 GOLGA8DPQ0D2H9 430 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TRPC3Q13507 836 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 GRB14Q14449 540 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SUZ12Q15022 739 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 ECM1Q16610 540 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TPD52L1Q16890 204 aaPredicted RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 BOLA3Q53S33 107 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 EARS2Q5JPH6 523 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 LIN54Q6MZP7 749 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SGMS1Q86VZ5 419 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 MAML3Q96JK9 1138 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 FAM49AQ9H0Q0 323 aaPredicted RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 OGDHLQ9ULD0 1010 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 FAM205CA6NFA0 338 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 H7C4K7 107 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 KCNJ13O60928 360 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 URI1O94763 535 aaPredicted RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 DEXIO95424 95 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SYN1P17600 705 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 ALAS2P22557 587 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 SLC14A2Q15849 920 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 ANO4Q32M45 955 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 FNIP1Q8TF40 1166 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 HLA-CQ95604 372 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 NCLNQ969V3 563 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 PLIN2Q99541 437 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 RAD9AQ99638 391 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 TLE6Q9H808 572 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 MTRF1LQ9UGC7 380 aaKnown RBP7.04□□□□□ -1.28
SMG1-217ENST00000569764 ZMYM5Q9UJ78 669 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 PPT2Q9UMR5 302 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 PHF24Q9UPV7 400 aa7.04□□□□□ -1.28
SMG1-217ENST00000569764 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms