RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 F8W810 466 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 LPXNO60711 386 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 CDC25BP30305 580 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 GNL1P36915 607 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-212ENST00000569575 ZNF75DP51815 510 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 LRMPQ12912 555 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 WSCD1Q658N2 575 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-212ENST00000569575 VSTM4Q8IW00 320 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 POF1BQ8WVV4 589 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 NAA15Q9BXJ9 866 aaKnown RBP25.07■■□□□ 1.6
RAB40C-212ENST00000569575 FAM207AQ9NSI2 230 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-212ENST00000569575 KIAA1257Q9ULG3 409 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 MAFFQ9ULX9 164 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 STXBP5LQ9Y2K9 1186 aa25.07■■□□□ 1.6
RAB40C-212ENST00000569575 LRRN2O75325 713 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 ARHGEF15O94989 841 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 TPM1P09493 284 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 CCDC172P0C7W6 258 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 IGFBP6P24592 240 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 TKTP29401 623 aaKnown RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 SMC1AQ14683 1233 aaKnown RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 MAPRE1Q15691 268 aaKnown RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 VARS2Q5ST30 1063 aaKnown RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 CACNA2D4Q7Z3S7 1137 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 CEP57Q86XR8 500 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 TMEM130Q8N3G9 435 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 ZNF397Q8NF99 534 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-212ENST00000569575 VN1R3Q9BXE9 311 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 GANQ9H2C0 597 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 RXFP1Q9HBX9 757 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 CISHQ9NSE2 258 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 POLIQ9UNA4 740 aa25.06■■□□□ 1.6
RAB40C-212ENST00000569575 CILPO75339 1184 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 NOL4O94818 638 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 BPIFB4P59827 614 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 RRAGAQ7L523 313 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 TMC7Q7Z402 723 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 ARHGEF19Q8IW93 802 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 CRYBG2Q8N1P7 616 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 OR6B3Q8NGW1 331 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 LNX1Q8TBB1 728 aaPredicted RBP25.05■■□□□ 1.6
RAB40C-212ENST00000569575 KBTBD7Q8WVZ9 684 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 ARNTL2Q8WYA1 636 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 SHC3Q92529 594 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 ANP32BQ92688 251 aaKnown RBP25.05■■□□□ 1.6
RAB40C-212ENST00000569575 NT5C1AQ9BXI3 368 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 ALG13Q9NP73 1137 aaKnown RBP25.05■■□□□ 1.6
RAB40C-212ENST00000569575 DDX43Q9NXZ2 648 aaKnown RBP25.05■■□□□ 1.6
RAB40C-212ENST00000569575 MTRRQ9UBK8 725 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 CDH9Q9ULB4 789 aa25.05■■□□□ 1.6
RAB40C-212ENST00000569575 I3L4J1 428 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 FSCN2O14926 492 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 TBC1D4O60343 1298 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 LILRB3O75022 631 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 PAEPP09466 180 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 WEE2P0C1S8 567 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 POLR2FP61218 127 aaKnown RBP25.04■■□□□ 1.6
RAB40C-212ENST00000569575 RTP2Q5QGT7 225 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 SLC8B1Q6J4K2 584 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 UBR7Q8N806 425 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 MRPL43Q8N983 215 aaKnown RBP25.04■■□□□ 1.6
RAB40C-212ENST00000569575 RIN2Q8WYP3 895 aaPredicted RBP25.04■■□□□ 1.6
RAB40C-212ENST00000569575 PPP2R3CQ969Q6 453 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 KREMEN1Q96MU8 473 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 SPAG5Q96R06 1193 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 EMILIN2Q9BXX0 1053 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 SMYD3Q9H7B4 428 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 MTUS1Q9ULD2 1270 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 TRIOBPQ9H2D6 2365 aa25.04■■□□□ 1.6
RAB40C-212ENST00000569575 PLXNA4Q9HCM2 1894 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 A8MXQ7 604 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 AP5Z1O43299 807 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 TSPY1Q01534 308 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 PSMD5Q16401 504 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 CTXN3Q4LDR2 81 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 IQCEQ6IPM2 695 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 TAS1R1Q7RTX1 841 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 DCP1BQ8IZD4 617 aaKnown RBP25.03■■□□□ 1.6
RAB40C-212ENST00000569575 TCF25Q9BQ70 676 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 MRPL45Q9BRJ2 306 aaKnown RBP25.03■■□□□ 1.6
RAB40C-212ENST00000569575 TTYH3Q9C0H2 523 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 ENTPD7Q9NQZ7 604 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 CAPN11Q9UMQ6 739 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 VWA8A3KMH1 1905 aa25.03■■□□□ 1.6
RAB40C-212ENST00000569575 GRM6O15303 877 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 CXCL14O95715 111 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 ACO1P21399 889 aaKnown RBP25.02■■□□□ 1.6
RAB40C-212ENST00000569575 STAT1P42224 750 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 CDH8P55286 799 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 PTPN14Q15678 1187 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 ZNF697Q5TEC3 545 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 PPFIBP1Q86W92 1011 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 C2orf15Q8WU43 125 aaKnown RBP25.02■■□□□ 1.6
RAB40C-212ENST00000569575 SYN2Q92777 582 aaPredicted RBP25.02■■□□□ 1.6
RAB40C-212ENST00000569575 SDCBP2Q9H190 292 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 LUC7L2Q9Y383 392 aaKnown RBP25.02■■□□□ 1.6
RAB40C-212ENST00000569575 FHOD1Q9Y613 1164 aa25.02■■□□□ 1.6
RAB40C-212ENST00000569575 ADCY5O95622 1261 aa25.01■■□□□ 1.59
RAB40C-212ENST00000569575 POU3F3P20264 500 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms