RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ZSWIM1Q9BR11 485 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 MUC13Q9H3R2 512 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 NRBP2Q9NSY0 501 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 AURKCQ9UQB9 309 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 C5orf60A6NFR6 353 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SMNDC1O75940 238 aaKnown RBP eCLIP7.42□□□□□ -1.224e-80■□□□□ 11.1
CNOT1-216ENST00000569240 MYO1DO94832 1006 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 MFN2O95140 757 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PIK3R1P27986 724 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 VCPP55072 806 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ARHGEF16Q5VV41 709 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 FLCNQ8NFG4 579 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PDCD6IPQ8WUM4 868 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ADPGKQ9BRR6 497 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 KATNAL1Q9BW62 490 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PLB1Q6P1J6 1458 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CD3EAPO15446 510 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TRMUO75648 421 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GDF11O95390 407 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PDGFRBP09619 1106 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 NUP62P37198 522 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 BFSP2Q13515 415 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PLS1Q14651 629 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 DRAP1Q14919 205 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TPCN2Q8NHX9 752 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SLC8A2Q9UPR5 921 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ATP8B3O60423 1300 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TBX3O15119 743 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 MYL2P10916 166 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 HOXB8P17481 243 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CCNA2P20248 432 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PSMA2P25787 234 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CASP2P42575 452 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ATN1P54259 1190 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 YWHAHQ04917 246 aaPredicted RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 LONRF1Q17RB8 773 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 SCYL2Q6P3W7 929 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 PLEKHM3Q6ZWE6 761 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TMIEQ8NEW7 156 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 POMGNT1Q8WZA1 660 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CHID1Q9BWS9 393 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TRIM9Q9C026 710 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 INTS2Q9H0H0 1204 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 HEATR9A2RTY3 570 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GNB5O14775 395 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 AXIN1O15169 862 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 ANXA1P04083 346 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 RAB27AP51159 221 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GALCP54803 685 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GRIK3Q13003 919 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 TCIRG1Q13488 830 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 C1DQ13901 141 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 CTTNQ14247 550 aaKnown RBP7.42□□□□□ -1.22
CNOT1-216ENST00000569240 GRAMD1CQ8IYS0 662 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 DHRSXQ8N5I4 330 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 DYRK4Q9NR20 520 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 KRT84Q9NSB2 600 aa7.42□□□□□ -1.22
CNOT1-216ENST00000569240 VPS4BO75351 444 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 PLOD1Q02809 727 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TRAF3Q13114 568 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NR1D2Q14995 579 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SLC5A9Q2M3M2 681 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 STRA8Q7Z7C7 330 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 WDR36Q8NI36 951 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 NAT14Q8WUY8 206 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 OXNAD1Q96HP4 312 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ASB2Q96Q27 587 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TMEM79Q9BSE2 394 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 PICK1Q9NRD5 415 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 THAP1Q9NVV9 213 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CEP170Q5SW79 1584 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 LRRIQ4A6NIV6 560 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ENO3P13929 434 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 MFSD5Q6N075 450 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ARCQ7LC44 396 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 ARID3BQ8IVW6 561 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 HINFPQ9BQA5 517 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CLK4Q9HAZ1 481 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SSU72Q9NP77 194 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 C20orf96Q9NUD7 363 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 GNPTGQ9UJJ9 305 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 RAD51BO15315 384 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 TIMM44O43615 452 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 PABPC1P11940 636 aaKnown RBP7.41□□□□□ -1.22
CNOT1-216ENST00000569240 MUTP22033 750 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SNAP25P60880 206 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 COASYQ13057 564 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CCNG2Q16589 344 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 C2CD6Q53TS8 623 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 SLC26A11Q86WA9 606 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 MCPH1Q8NEM0 835 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 GLMNQ92990 594 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 BBS2Q9BXC9 721 aa7.41□□□□□ -1.22
CNOT1-216ENST00000569240 CALN1Q9BXU9 219 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms