RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NOTCH4Q99466 2003 aa9.46□□□□□ -0.9
SMG1-216ENST00000569122 TDRD15B5MCY1 1934 aaKnown RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 M0QZQ0 153 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 OPHN1O60890 802 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 MCF2P10911 925 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 ENGP17813 658 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 RPS6KB1P23443 525 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 HOXC13P31276 330 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 SOX4Q06945 474 aaPredicted RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 SCAPQ12770 1279 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 PSMD2Q13200 908 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 COL28A1Q2UY09 1125 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 ZNF568Q3ZCX4 644 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 STXBP5Q5T5C0 1151 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 SLC23A3Q6PIS1 610 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 C19orf48Q6RUI8 117 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 RAB44Q7Z6P3 723 aaPredicted RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 GPIHBP1Q8IV16 184 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 CHCHD4Q8N4Q1 142 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 ERMNQ8TAM6 284 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 KCNB2Q92953 911 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 CD101Q93033 1021 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 ZNF274Q96GC6 653 aaPredicted RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 PGLYRP2Q96PD5 576 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 MRPL4Q9BYD3 311 aaKnown RBP9.45□□□□□ -0.9
SMG1-216ENST00000569122 EBF3Q9H4W6 596 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 TDP1Q9NUW8 608 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 KCNG1Q9UIX4 513 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 PCDHB9Q9Y5E1 797 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 LAMA1P25391 3075 aa9.45□□□□□ -0.9
SMG1-216ENST00000569122 SETXQ7Z333 2677 aaKnown RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 SPAARA0A1B0GVQ0 90 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 PRAMEF12O95522 483 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 CAPNS1P04632 268 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 TYMPP19971 482 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 MUTP22033 750 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 TXKP42681 527 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 MAPK8P45983 427 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 OSTNP61366 133 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 GFPT1Q06210 699 aaPredicted RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 SLC14A1Q13336 389 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 ZNF268Q14587 947 aaPredicted RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 DUOXA1Q1HG43 343 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 PADI6Q6TGC4 694 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 DSTYKQ6XUX3 929 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 RASSF3Q86WH2 238 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 C2orf15Q8WU43 125 aaKnown RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 WASF1Q92558 559 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 TSPAN18Q96SJ8 248 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 ACO2Q99798 780 aaKnown RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 POLR3CQ9BUI4 534 aaPredicted RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 TMEM134Q9H6X4 195 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 PLEKHA5Q9HAU0 1116 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 HPS4Q9NQG7 708 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 TBX20Q9UMR3 447 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 SLC6A14Q9UN76 642 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 KCNJ14Q9UNX9 436 aa9.44□□□□□ -0.9
SMG1-216ENST00000569122 RBM19Q9Y4C8 960 aaKnown RBP9.44□□□□□ -0.9
SMG1-216ENST00000569122 MTMR11A4FU01 709 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 PATE3B3GLJ2 98 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 TK2O00142 265 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 NEMFO60524 1076 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 SYPP08247 313 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 CPA1P15085 419 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 CYP3A5P20815 502 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 HSPA4P34932 840 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 GJA4P35212 333 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 HSF5Q4G112 596 aaPredicted RBP9.43□□□□□ -0.9
SMG1-216ENST00000569122 BMP2KLQ5H9B9 411 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 LYSMD4Q5XG99 296 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 OVOS1Q6IE37 1185 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 ANO7Q6IWH7 933 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 ATAD1Q8NBU5 361 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 ADAMTS14Q8WXS8 1223 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 MRPS31Q92665 395 aaKnown RBP9.43□□□□□ -0.9
SMG1-216ENST00000569122 C18orf25Q96B23 403 aaPredicted RBP9.43□□□□□ -0.9
SMG1-216ENST00000569122 KIF2CQ99661 725 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 SLC46A2Q9BY10 475 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 CDT1Q9H211 546 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 PTPRHQ9HD43 1115 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
SMG1-216ENST00000569122 USP20Q9Y2K6 914 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 SLC27A5Q9Y2P5 690 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 WDFY3Q8IZQ1 3526 aa9.43□□□□□ -0.9
SMG1-216ENST00000569122 NBEAQ8NFP9 2946 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
SMG1-216ENST00000569122 CCDC169A6NNP5 214 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 AP5Z1O43299 807 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 CFIP05156 583 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 SERPINF2P08697 491 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 SPATA31C1P0DKV0 1188 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 RPA1P27694 616 aa9.42□□□□□ -0.9
SMG1-216ENST00000569122 LRPAP1P30533 357 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms