RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 DAB2IPQ5VWQ8 1189 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 FSTL4Q6MZW2 842 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 TMC8Q8IU68 726 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 C4orf19Q8IY42 314 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 SYNPOQ8N3V7 929 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 CSGALNACT1Q8TDX6 532 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 GOLGA2P5Q9HBQ8 144 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 PPME1Q9Y570 386 aa13.01□□□□□ -0.33
VPS9D1-207ENST00000568691 APC2O95996 2303 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 ASXL3Q9C0F0 2248 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 SPAARA0A1B0GVQ0 90 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 PRRG1O14668 218 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 TBX3O15119 743 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 SLC26A4O43511 780 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 CCNT1O60563 726 aaKnown RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 B3GAT3O94766 335 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 MYL4P12829 197 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 YWHABP31946 246 aaKnown RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 SOX4Q06945 474 aaPredicted RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 UPP1Q16831 310 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 DTHD1Q6ZMT9 781 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 HACE1Q8IYU2 909 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 TCP11Q8WWU5 503 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 KIF12Q96FN5 646 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 CLIC6Q96NY7 704 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 PPP1R10Q96QC0 940 aaKnown RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 HHIPQ96QV1 700 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 MTRQ99707 1265 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 LXNQ9BS40 222 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 NFKBIZQ9BYH8 718 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 RAB34Q9BZG1 259 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 PDZD7Q9H5P4 517 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 GRPEL1Q9HAV7 217 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 FBRSL1Q9HCM7 1045 aaKnown RBP13□□□□□ -0.33
VPS9D1-207ENST00000568691 KALRNO60229 2985 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 TENM4Q6N022 2769 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 ABCA7Q8IZY2 2146 aa13□□□□□ -0.33
VPS9D1-207ENST00000568691 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 OTOL1A6NHN0 477 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 MEFVO15553 781 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 FAM193AP78312 1265 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 IRX4P78413 519 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 TWF1Q12792 350 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 MXD4Q14582 209 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 XKR9Q5GH70 373 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 GLRA4Q5JXX5 417 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 EEF1DP3Q658K8 133 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 PIP4P1Q86T03 277 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 GAS2L3Q86XJ1 694 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 CRISPLD1Q9H336 500 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 MAGEF1Q9HAY2 307 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 KCNMB3Q9NPA1 279 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 TMEM9BQ9NQ34 198 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 FBXL5Q9UKA1 691 aa12.99□□□□□ -0.33
VPS9D1-207ENST00000568691 PRAMEF12O95522 483 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 ARPP19P56211 112 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 GRIN1Q05586 938 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 TYRO3Q06418 890 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CTTNQ14247 550 aaKnown RBP12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CALCRLQ16602 461 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 STX1AQ16623 288 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 TMEM196Q5HYL7 178 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CYP4A22Q5TCH4 519 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 SASS6Q6UVJ0 657 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 KRBA2Q6ZNG9 492 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 ARID3BQ8IVW6 561 aaPredicted RBP12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 EXOC8Q8IYI6 725 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 IGSF22Q8N9C0 903 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 HAS1Q92839 578 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 DYDC2Q96IM9 177 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 MTMR9Q96QG7 549 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CCSER1Q9C0I3 900 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 FZD8Q9H461 694 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CUEDC2Q9H467 287 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 INVSQ9Y283 1065 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 CFAP46Q8IYW2 2715 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
VPS9D1-207ENST00000568691 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 ACTN4O43707 911 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 BCKDHBP21953 392 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 ELF1P32519 619 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 DEKP35659 375 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 GAREM2Q75VX8 874 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 SLFN12Q8IYM2 578 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 CHCHD4Q8N4Q1 142 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
VPS9D1-207ENST00000568691 TMEM60Q9H2L4 133 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms