RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	MRFAP1L1	Q96HT8	127 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	TCF25	Q9BQ70	676 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	NUP58	Q9BVL2	599 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	SMYD3	Q9H7B4	428 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	ALG13	Q9NP73	1137 aa	Known RBP	12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	SIX2	Q9NPC8	291 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	ENTPD7	Q9NQZ7	604 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	MRPL17	Q9NRX2	175 aa	Known RBP	12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	POLI	Q9UNA4	740 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	BACE2	Q9Y5Z0	518 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	IRAK3	Q9Y616	596 aa		12.84	□□□□□ -0.35
FANCA-231	ENST00000568626	FSD2	A1L4K1	749 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	OR6C75	A6NL08	312 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	GABRD	O14764	452 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	GRM6	O15303	877 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	LRRN2	O75325	713 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	UCHL3	P15374	230 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	PBX1	P40424	430 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	MRPL58	Q14197	206 aa	Known RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	PTPN14	Q15678	1187 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	PSMD5	Q16401	504 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	KIAA0319	Q5VV43	1072 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	PHLDB3	Q6NSJ2	640 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	TMC7	Q7Z402	723 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	CEP57	Q86XR8	500 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	FMNL3	Q8IVF7	1028 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	ARHGEF19	Q8IW93	802 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	KBTBD7	Q8WVZ9	684 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	RIN2	Q8WYP3	895 aa	Predicted RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	TATDN2	Q93075	761 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	PPP2R3C	Q969Q6	453 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	EDEM3	Q9BZQ6	932 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	GAN	Q9H2C0	597 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	SNX25	Q9H3E2	840 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	CERS4	Q9HA82	394 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	GRPEL1	Q9HAV7	217 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.83	□□□□□ -0.36	1e-7	■■■■■ 115.4
FANCA-231	ENST00000568626	CISH	Q9NSE2	258 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	FAM207A	Q9NSI2	230 aa	Predicted RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	DDX43	Q9NXZ2	648 aa	Known RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	MTRR	Q9UBK8	725 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	BARX2	Q9UMQ3	279 aa	Predicted RBP	12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	STXBP5L	Q9Y2K9	1186 aa		12.83	□□□□□ -0.36
FANCA-231	ENST00000568626	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	FSCN2	O14926	492 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	WEE2	P0C1S8	567 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	GNL1	P36915	607 aa	Predicted RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	RAP1GAP	P47736	663 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	NDUFV1	P49821	464 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	TSPY1	Q01534	308 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	TRIM14	Q14142	442 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	CTXN3	Q4LDR2	81 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	SPECC1L	Q69YQ0	1117 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	IQCE	Q6IPM2	695 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	DPY19L2P1	Q6NXN4	242 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	RRAGA	Q7L523	313 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	TAS1R1	Q7RTX1	841 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	VSTM4	Q8IW00	320 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	UBR7	Q8N806	425 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	OR6B3	Q8NGW1	331 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	LNX1	Q8TBB1	728 aa	Predicted RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	GDPD5	Q8WTR4	605 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	MRPL38	Q96DV4	380 aa	Known RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	TNIP3	Q96KP6	325 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	B3GALT6	Q96L58	329 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	FAM161B	Q96MY7	647 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	ARID3A	Q99856	593 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	ACBD6	Q9BR61	282 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	MRPL45	Q9BRJ2	306 aa	Known RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	NAA15	Q9BXJ9	866 aa	Known RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	EMILIN2	Q9BXX0	1053 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	RXFP1	Q9HBX9	757 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	LMCD1	Q9NZU5	365 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	CEP72	Q9P209	647 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	FNIP2	Q9P278	1114 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	DNAJC12	Q9UKB3	198 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	CDH9	Q9ULB4	789 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	MYO6	Q9UM54	1294 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.82	□□□□□ -0.36	9e-9	■□□□□ 8.4
FANCA-231	ENST00000568626	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	FHOD1	Q9Y613	1164 aa		12.82	□□□□□ -0.36
FANCA-231	ENST00000568626	UNC80	Q8N2C7	3258 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626		A8MXQ7	604 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	TBC1D4	O60343	1298 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	LILRB3	O75022	631 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	CILP	O75339	1184 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	NOL4	O94818	638 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	C1R	P00736	705 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	ADH1A	P07327	375 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	TPM1	P09493	284 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	CD58	P19256	250 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	ACO1	P21399	889 aa	Known RBP	12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	KLK7	P49862	253 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	MRE11	P49959	708 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	ZNF75D	P51815	510 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	POLR2F	P61218	127 aa	Known RBP	12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	MAPRE1	Q15691	268 aa	Known RBP	12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	PLPP4	Q5VZY2	271 aa		12.81	□□□□□ -0.36
FANCA-231	ENST00000568626	SLC8B1	Q6J4K2	584 aa		12.81	□□□□□ -0.36

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