RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 DNAJB7Q7Z6W7 309 aaPredicted RBP20.42■□□□□ 0.86
SPSB3-210ENST00000568416 IRF7Q92985 503 aa20.42■□□□□ 0.86
SPSB3-210ENST00000568416 SNX21Q969T3 373 aa20.42■□□□□ 0.86
SPSB3-210ENST00000568416 CACNA1HO95180 2353 aa20.42■□□□□ 0.86
SPSB3-210ENST00000568416 SPTLC2O15270 562 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 GDI1P31150 447 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 TUFMP49411 452 aaKnown RBP20.41■□□□□ 0.86
SPSB3-210ENST00000568416 FZD5Q13467 585 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 E2F4Q16254 413 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 GAREM2Q75VX8 874 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 MFSD6LQ8IWD5 586 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 CCDC65Q8IXS2 484 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 SYCP3Q8IZU3 236 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 ADSSL1Q8N142 457 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 THEM5Q8N1Q8 247 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 ZNF560Q96MR9 790 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 MKNK1Q9BUB5 465 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 TNMDQ9H2S6 317 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 TMEM206Q9H813 350 aa20.41■□□□□ 0.86
SPSB3-210ENST00000568416 RBAKQ9NYW8 714 aaPredicted RBP20.41■□□□□ 0.86
SPSB3-210ENST00000568416 TFIP11Q9UBB9 837 aaKnown RBP20.41■□□□□ 0.86
SPSB3-210ENST00000568416 MRPS17Q9Y2R5 130 aaKnown RBP20.41■□□□□ 0.86
SPSB3-210ENST00000568416 USP34Q70CQ2 3546 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 HEPACAM2A8MVW5 462 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 NCAM2O15394 837 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 PRPF6O94906 941 aaKnown RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 FGF19O95750 216 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 ANK1P16157 1881 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 PNPLA4P41247 253 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 RPS9P46781 194 aaKnown RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 TFAMQ00059 246 aaKnown RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 SMARCB1Q12824 385 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 STXBP5Q5T5C0 1151 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 ITIH5Q86UX2 942 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 LRRTM3Q86VH5 581 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 ZNF687Q8N1G0 1237 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 C1orf127Q8N9H9 656 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 CXorf38Q8TB03 319 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 C2orf15Q8WU43 125 aaKnown RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 E2F7Q96AV8 911 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 RSPRY1Q96DX4 576 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 ZNF396Q96N95 335 aaPredicted RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 SEPT5Q99719 369 aaPredicted RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 SLITRK6Q9H5Y7 841 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 KBTBD4Q9NVX7 518 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 SPATA6Q9NWH7 488 aaPredicted RBP20.4■□□□□ 0.86
SPSB3-210ENST00000568416 FBXO4Q9UKT5 387 aa20.4■□□□□ 0.86
SPSB3-210ENST00000568416 COL4A2P08572 1712 aa20.39■□□□□ 0.86
SPSB3-210ENST00000568416 GOLGA8IPA6NC78 632 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 GOLGA8JA6NMD2 632 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ARNTLO00327 626 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 MAN2B1O00754 1011 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 LAMTOR5O43504 91 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 EXTL3O43909 919 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 YEATS4O95619 227 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 LMNAP02545 664 aaKnown RBP20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ITGB3P05106 788 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ATF6P18850 670 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 POLR2BP30876 1174 aaKnown RBP20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ZNF528Q3MIS6 628 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 MGAT5BQ3V5L5 792 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ZC3H14Q6PJT7 736 aaKnown RBP20.39■□□□□ 0.85
SPSB3-210ENST00000568416 SPPL2BQ8TCT7 592 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 CACTINQ8WUQ7 758 aaKnown RBP20.39■□□□□ 0.85
SPSB3-210ENST00000568416 LPIN3Q9BQK8 851 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 LRRC27Q9C0I9 530 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ATXN3LQ9H3M9 355 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 CUEDC2Q9H467 287 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 AGAP1Q9UPQ3 857 aa20.39■□□□□ 0.85
SPSB3-210ENST00000568416 ZNF263O14978 683 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 HAPLN1P10915 354 aaPredicted RBP20.38■□□□□ 0.85
SPSB3-210ENST00000568416 GABRR2P28476 465 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 SCARA3Q6AZY7 606 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 DCP1BQ8IZD4 617 aaKnown RBP20.38■□□□□ 0.85
SPSB3-210ENST00000568416 LRRC52Q8N7C0 313 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 GLIS3Q8NEA6 775 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 HPS3Q969F9 1004 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 TRIM9Q9C026 710 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 IL21Q9HBE4 155 aa20.38■□□□□ 0.85
SPSB3-210ENST00000568416 KIAA0391O15091 583 aaKnown RBP20.37■□□□□ 0.85
SPSB3-210ENST00000568416 CUTAO60888 179 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 CDR1P51861 262 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 FCHO2Q0JRZ9 810 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 VEPH1Q14D04 833 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 GPR158Q5T848 1215 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 SHC4Q6S5L8 630 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 ARID3BQ8IVW6 561 aaPredicted RBP20.37■□□□□ 0.85
SPSB3-210ENST00000568416 GPD1LQ8N335 351 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 PDCL2Q8N4E4 241 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 FAM200AQ8TCP9 573 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 FAM84AQ96KN4 292 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 PDE11AQ9HCR9 933 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 TMLHEQ9NVH6 421 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 ITGA11Q9UKX5 1188 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 L1RE1Q9UN81 338 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 PIAS3Q9Y6X2 628 aa20.37■□□□□ 0.85
SPSB3-210ENST00000568416 CHADO15335 359 aa20.36■□□□□ 0.85
SPSB3-210ENST00000568416 WEE1P30291 646 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms