RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 CD302Q8IX05 232 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CCDC105Q8IYK2 499 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TMEM161BQ8NDZ6 487 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 GPR152Q8TDT2 470 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 FGF13Q92913 245 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 BORCS6Q96GS4 357 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC39A13Q96H72 371 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SNX27Q96L92 541 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 C8orf48Q96LL4 319 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NELL2Q99435 816 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 KIF2CQ99661 725 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CORO1BQ9BR76 489 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 MMTAG2Q9BU76 263 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 BCO2Q9BYV7 579 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SEMA4AQ9H3S1 761 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 RPF1Q9H9Y2 349 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 TBC1D17Q9HA65 648 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PARVGQ9HBI0 331 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CYP4F11Q9HBI6 524 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 GOLGA2P5Q9HBQ8 144 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 PTPRHQ9HD43 1115 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CYLDQ9NQC7 956 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ARHGEF3Q9NR81 526 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC2A4RGQ9NR83 387 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 GDE1Q9NZC3 331 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CNTN3Q9P232 1028 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 DNMT3BQ9UBC3 853 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 CCDC39Q9UFE4 941 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ODF2LQ9ULJ1 636 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 MRPS17Q9Y2R5 130 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 R3HCC1Q9Y3T6 440 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NUMBLQ9Y6R0 609 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 WDFY4Q6ZS81 3184 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 ANK1P16157 1881 aa5.07□□□□□ -1.6
HERPUD1-213ENST00000568358 NOTCH4Q99466 2003 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 VPS37CA5D8V6 355 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 KRBA1A5PL33 1030 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PROB1E7EW31 1015 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 I3L4J1 428 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 K7ENM7 598 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 OGTO15294 1046 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ADAM12O43184 909 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PI15O43692 258 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 RNF40O75150 1001 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 MICAL2O94851 1124 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ABLIM3O94929 683 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 DCNP07585 359 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PDGFRBP09619 1106 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 MAPTP10636 758 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 CPB1P15086 417 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 CYP3A5P20815 502 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PROZP22891 400 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 DDIT3P35638 169 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 MAGEA9P43362 315 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ALDH1A3P47895 512 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 EPHB3P54753 998 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC12A3P55017 1021 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 GPC5P78333 572 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 NTHL1P78549 312 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ROR1Q01973 937 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PRKCQQ04759 706 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 YWHAHQ04917 246 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 MCL1Q07820 350 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ADCY1Q08828 1119 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PLD1Q13393 1074 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SNW1Q13573 536 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PPP2R5DQ14738 602 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 UBXN2BQ14CS0 331 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 POSTNQ15063 836 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 TAF12Q16514 161 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC10A6Q3KNW5 377 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC44A4Q53GD3 710 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF394Q53GI3 561 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ZBTB41Q5SVQ8 909 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ALG1LQ6GMV1 187 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SLC8B1Q6J4K2 584 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ARMCX5Q6P1M9 558 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 RSPO2Q6UXX9 243 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ZNF852Q6ZMS4 543 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 FRMD5Q7Z6J6 570 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 KIAA0907Q7Z7F0 614 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 METTL23Q86XA0 190 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 YAF2Q8IY57 180 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 TCEAL8Q8IYN2 117 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 DAW1Q8N136 415 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 LEMD2Q8NC56 503 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 BEST2Q8NFU1 509 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 TPCN2Q8NHX9 752 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ITFG1Q8TB96 612 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 FEZF2Q8TBJ5 459 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 FBF1Q8TES7 1133 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SECISBP2LQ93073 1101 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 E2F7Q96AV8 911 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 C18orf25Q96B23 403 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 MCRS1Q96EZ8 462 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 ZBTB45Q96K62 511 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 SUSD3Q96L08 255 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 TBC1D32Q96NH3 1257 aa5.06□□□□□ -1.6
HERPUD1-213ENST00000568358 PNMA5Q96PV4 448 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms