RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 PSMD5Q16401 504 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 KLHDC7AQ5VTJ3 777 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 ZNF280DQ6N043 979 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 GJB7Q6PEY0 223 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 PRSS55Q6UWB4 352 aaPredicted RBP16.81■□□□□ 0.28
SPG7-218ENST00000568205 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 LNX1Q8TBB1 728 aaPredicted RBP16.81■□□□□ 0.28
SPG7-218ENST00000568205 KAT5Q92993 513 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 PRDM12Q9H4Q4 367 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 UBE2TQ9NPD8 197 aaPredicted RBP16.81■□□□□ 0.28
SPG7-218ENST00000568205 MRPL17Q9NRX2 175 aaKnown RBP16.81■□□□□ 0.28
SPG7-218ENST00000568205 FAM207AQ9NSI2 230 aaPredicted RBP16.81■□□□□ 0.28
SPG7-218ENST00000568205 SSX2IPQ9Y2D8 614 aa16.81■□□□□ 0.28
SPG7-218ENST00000568205 LILRB3O75022 631 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 CXCL14O95715 111 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 CD58P19256 250 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 IRS1P35568 1242 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 PBX1P40424 430 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 LHX1P48742 406 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 SMC1AQ14683 1233 aaKnown RBP16.8■□□□□ 0.28
SPG7-218ENST00000568205 PTPROQ16827 1216 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 CTXN3Q4LDR2 81 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 PLPP4Q5VZY2 271 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
SPG7-218ENST00000568205 GPR153Q6NV75 609 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 NEK11Q8NG66 645 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 MICAL1Q8TDZ2 1067 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 FAM81BQ96LP2 452 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 KREMEN1Q96MU8 473 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 TRIM5Q9C035 493 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 GANQ9H2C0 597 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 FAM124BQ9H5Z6 455 aaPredicted RBP16.8■□□□□ 0.28
SPG7-218ENST00000568205 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPG7-218ENST00000568205 MTRRQ9UBK8 725 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 DNAJC12Q9UKB3 198 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 BACE2Q9Y5Z0 518 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
SPG7-218ENST00000568205 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 EPHB6O15197 1021 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 TBC1D4O60343 1298 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 NOL4O94818 638 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 UCHL3P15374 230 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 RFX1P22670 979 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 CA8P35219 290 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 GNL1P36915 607 aaPredicted RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 MFAP3P55082 362 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 YWHAEP62258 255 aaKnown RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 CREMQ03060 361 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 INCA1Q0VD86 236 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 THEM5Q8N1Q8 247 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 UBR7Q8N806 425 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 MRPL43Q8N983 215 aaKnown RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 OR6B3Q8NGW1 331 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 MRPL38Q96DV4 380 aaKnown RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 RTP3Q9BQQ7 232 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 RXFP1Q9HBX9 757 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 CISHQ9NSE2 258 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 DDX43Q9NXZ2 648 aaKnown RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
SPG7-218ENST00000568205 DAAM1Q9Y4D1 1078 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 FHOD1Q9Y613 1164 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 NLRC5Q86WI3 1866 aa16.79■□□□□ 0.28
SPG7-218ENST00000568205 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 C2orf71A6NGG8 1288 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 OR6C75A6NL08 312 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 A8MXQ7 604 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 HCRTO43612 131 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 CILPO75339 1184 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 RPL17P18621 184 aaKnown RBP16.78■□□□□ 0.28
SPG7-218ENST00000568205 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
SPG7-218ENST00000568205 PCSK1P29120 753 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 ZNF75DP51815 510 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 OR10T2Q8NGX3 314 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 FAM161BQ96MY7 647 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 NAA15Q9BXJ9 866 aaKnown RBP16.78■□□□□ 0.28
SPG7-218ENST00000568205 OXCT2Q9BYC2 517 aaPredicted RBP16.78■□□□□ 0.28
SPG7-218ENST00000568205 FNIP2Q9P278 1114 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 FBXL5Q9UKA1 691 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
SPG7-218ENST00000568205 STXBP5LQ9Y2K9 1186 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
SPG7-218ENST00000568205 CHD7Q9P2D1 2997 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 TEX28O15482 410 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
SPG7-218ENST00000568205 PDGFRBP09619 1106 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 ACAT1P24752 427 aaKnown RBP16.77■□□□□ 0.28
SPG7-218ENST00000568205 LMO2P25791 158 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 NDST1P52848 882 aa16.77■□□□□ 0.28
SPG7-218ENST00000568205 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.28
SPG7-218ENST00000568205 ARHGAP44Q17R89 818 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms