RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 GOLGA8AA7E2F4 631 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 KCNK3O14649 394 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 CTIFO43310 598 aaKnown RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 RFPL3O75679 317 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 IL18BPO95998 194 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 ASLP04424 464 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 PTGS1P23219 599 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 GPTP24298 496 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 GLRBP48167 497 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 TDO2P48775 406 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 ANTXR2P58335 489 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 HAND2P61296 217 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 CEBPZQ03701 1054 aaKnown RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 UBE4AQ14139 1066 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 SURF1Q15526 300 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 KRT40Q6A162 431 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 FAM109BQ6ICB4 259 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 MOB2Q70IA6 237 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 DDX53Q86TM3 631 aaKnown RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 TBC1D10CQ8IV04 446 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 LRRC8AQ8IWT6 810 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 REXO1L1PQ8IX06 675 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 DHX40Q8IX18 779 aaKnown RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 STPG3Q8N7X2 389 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 IGSF22Q8N9C0 903 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 SPC24Q8NBT2 197 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 NUDT10Q8NFP7 164 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 ESR2Q92731 530 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 NUDT11Q96G61 164 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 RNF26Q9BY78 433 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 KCNH7Q9NS40 1196 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 RBM28Q9NW13 759 aaKnown RBP5.93□□□□□ -1.46
CAPN3-217ENST00000567817 TUBE1Q9UJT0 475 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 ANAPC4Q9UJX5 808 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 ADAM29Q9UKF5 820 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 HPSEQ9Y251 543 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 INVSQ9Y283 1065 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 FAM205AQ6ZU69 1335 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 RPTORQ8N122 1335 aa5.93□□□□□ -1.46
CAPN3-217ENST00000567817 PSME4Q14997 1843 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ESYT3A0FGR9 886 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 H0Y858 1186 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 IFIT3O14879 490 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 AP5Z1O43299 807 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 B4GALT3O60512 393 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 HIP1RO75146 1068 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ZNF202O95125 648 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ASMTLO95671 621 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 PLATP00750 562 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 PFKFB1P16118 471 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 SFPQP23246 707 aaKnown RBP eCLIP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 HOXD10P28358 340 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 PHKA1P46020 1223 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 NDUFA8P51970 172 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 AKAP17AQ02040 695 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 MYL5Q02045 173 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 NFATC3Q12968 1075 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 WTAPQ15007 396 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 SF3B3Q15393 1217 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 TPD52L1Q16890 204 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ARHGAP44Q17R89 818 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 SUPT20HL1Q3ZLR7 823 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 CCDC178Q5BJE1 867 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 CAVIN4Q5BKX8 364 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 RESP18Q5W5W9 173 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 CPZQ66K79 652 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ZCCHC8Q6NZY4 707 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 CHST3Q7LGC8 479 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 MICU3Q86XE3 530 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 IQCA1Q86XH1 822 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 HOMER1Q86YM7 354 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 CERS3Q8IU89 383 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 MAGEB6Q8N7X4 407 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 MLKLQ8NB16 471 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 FAM122AQ96E09 287 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 WNK4Q96J92 1243 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 RNPC3Q96LT9 517 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ZNF830Q96NB3 372 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 FEZ1Q99689 392 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 TACO1Q9BSH4 297 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 UBAC1Q9BSL1 405 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 BOCQ9BWV1 1114 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 GOLPH3LQ9H4A5 285 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 LY9Q9HBG7 655 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 PIH1D3Q9NQM4 214 aaKnown RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 INCENPQ9NQS7 918 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 BTBD7Q9P203 1132 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 DENND2AQ9ULE3 1009 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 B3GALT1Q9Y5Z6 326 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ZNF804BA4D1E1 1349 aa5.92□□□□□ -1.46
CAPN3-217ENST00000567817 ASTN2O75129 1339 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-217ENST00000567817 A0A1B0GVL5 298 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 WNT10BO00744 389 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 SCDO00767 359 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 OPA1O60313 960 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 DNAJC8O75937 253 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-217ENST00000567817 MBD4O95243 580 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 MMP1P03956 469 aa5.91□□□□□ -1.46
CAPN3-217ENST00000567817 SKILP12757 684 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms