RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CNGA4Q8IV77 575 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 FAM186BQ8IYM0 893 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 FBXL6Q8N531 539 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 PPP1R13LQ8WUF5 828 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 SEPT1Q8WYJ6 367 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CCDC51Q96ER9 411 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 DRC1Q96MC2 740 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 MFSD14AQ96MC6 490 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ACCSQ96QU6 501 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TIPINQ9BVW5 301 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 HAPLN2Q9GZV7 340 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 GBP3Q9H0R5 595 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 MMRN2Q9H8L6 949 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 MLXIPQ9HAP2 919 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ATP6V0A4Q9HBG4 840 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 SSU72Q9NP77 194 aaKnown RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 NLRC4Q9NPP4 1024 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 LARSQ9P2J5 1176 aaKnown RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 ARMCX3Q9UH62 379 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 TBX20Q9UMR3 447 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.24□□□□□ -1.41
SF3B3-210ENST00000567654 CORINQ9Y5Q5 1042 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 EMSYQ7Z589 1322 aa6.24□□□□□ -1.41
SF3B3-210ENST00000567654 BRCA2P51587 3418 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 MANSC4A6NHS7 340 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ASB14A6NK59 587 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 LRRC53A6NM62 1247 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 DKC1O60832 514 aaKnown RBP eCLIP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 MAFO75444 373 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 AFPP02771 609 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 TPM2P07951 284 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 GJB1P08034 283 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 H2AFB1P0C5Y9 115 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 H2AFB2P0C5Z0 115 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ZNF286BP0CG31 522 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PNMA6AP0CW24 399 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 EPB41P11171 864 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM21P19474 475 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 FSTP19883 344 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PON1P27169 355 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ADMP35318 185 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PSMC2P35998 433 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ARHGAP25P42331 645 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 POLGP54098 1239 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ZBED6P86452 979 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 RING1Q06587 406 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PPP3CAQ08209 521 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 DMP1Q13316 513 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 CDK5R2Q13319 367 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PWP1Q13610 501 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 CAPSQ13938 189 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 CCL14Q16627 93 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PRSS36Q5K4E3 855 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 DNTTIP2Q5QJE6 756 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ZBTB37Q5TC79 503 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 TCERG1LQ5VWI1 586 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 C17orf99Q6UX52 265 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 HDXQ7Z353 690 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 CBWD2Q8IUF1 395 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 C12orf56Q8IXR9 622 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 SYCP3Q8IZU3 236 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ABRAQ8N0Z2 381 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 LRRC71Q8N4P6 559 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 MCPH1Q8NEM0 835 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 OR8K1Q8NGG5 319 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 OLIG1Q8TAK6 271 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 SCFD2Q8WU76 684 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ZNF296Q8WUU4 475 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 AFG1LQ8WV93 481 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 GATAD2BQ8WXI9 593 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 USP6NLQ92738 828 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 KIFAP3Q92845 792 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 SAAL1Q96ER3 474 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ZNF668Q96K58 619 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 SPATA33Q96N06 139 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 FAM83CQ9BQN1 747 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 NTPCRQ9BSD7 190 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 NUP58Q9BVL2 599 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 RNPEPQ9H4A4 650 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 FBRSQ9HAH7 460 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 VTA1Q9NP79 307 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 METTL5Q9NRN9 209 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 HSPBP1Q9NZL4 362 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ARHGAP20Q9P2F6 1191 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 ARHGAP28Q9P2N2 729 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 TRIM10Q9UDY6 481 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 FAM184BQ9ULE4 1060 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 LUC7L2Q9Y383 392 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 FHOD1Q9Y613 1164 aa6.23□□□□□ -1.41
SF3B3-210ENST00000567654 TDRD15B5MCY1 1934 aaKnown RBP6.23□□□□□ -1.41
SF3B3-210ENST00000567654 HTTP42858 3142 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 LOC102724159A0A0B4J2E5 919 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 IGKV6-21A0A0C4DH24 114 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 SLC15A5A6NIM6 579 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 GFRA2O00451 464 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms