RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TNNI1P19237 187 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 KLRC2P26717 231 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 IFNAR2P48551 515 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 NR1H3Q13133 447 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 KYNUQ16719 465 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 LRRC38Q5VT99 294 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 HIBCHQ6NVY1 386 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 PPP1R21Q6ZMI0 780 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 GRAMD1AQ96CP6 724 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 RBM41Q96IZ5 413 aaKnown RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 PARK7Q99497 189 aaKnown RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 NCAPGQ9BPX3 1015 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 PARVAQ9NVD7 372 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 SEPT9Q9UHD8 586 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 IP6K2Q9UHH9 426 aa17.75■□□□□ 0.43
CMTM3-213ENST00000566756 R3HDM2Q9Y2K5 976 aaKnown RBP17.75■□□□□ 0.43
CMTM3-213ENST00000566756 GSTTP1A0A1W2PQM5 241 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 GJB6O95452 261 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 VNN1O95497 513 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 PTPN7P35236 360 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 NAMPTP43490 491 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 ELF3P78545 371 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-213ENST00000566756 SP4Q02446 784 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 MCL1Q07820 350 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 GALNTL6Q49A17 601 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 CCDC38Q502W7 563 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 WDR78Q5VTH9 848 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 CHADLQ6NUI6 762 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 RCOR2Q8IZ40 523 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 ZCCHC9Q8N567 271 aaKnown RBP17.74■□□□□ 0.43
CMTM3-213ENST00000566756 CCDC63Q8NA47 563 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 PPCSQ9HAB8 311 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 UBN1Q9NPG3 1134 aa17.74■□□□□ 0.43
CMTM3-213ENST00000566756 TPX2Q9ULW0 747 aaKnown RBP17.74■□□□□ 0.43
CMTM3-213ENST00000566756 CLTAP09496 248 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 BRAFP15056 766 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 ATP4AP20648 1035 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 GNA15P30679 374 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 AP3M2P53677 418 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 SLC18A1P54219 525 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 SOX10P56693 466 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 COPS2P61201 443 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF792Q3KQV3 632 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 IZUMO3Q5VZ72 239 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TRMT1LQ7Z2T5 733 aaKnown RBP17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TDRPQ86YL5 185 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 FEZF2Q8TBJ5 459 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 MAGEB18Q96M61 343 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TTC25Q96NG3 672 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 CGRRF1Q99675 332 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 PTPN18Q99952 460 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 NIFKQ9BYG3 293 aaKnown RBP17.73■□□□□ 0.43
CMTM3-213ENST00000566756 ARL2BPQ9Y2Y0 163 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TCP11X1B4DZS4 312 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 OATP04181 439 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TAS2R40P59535 323 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 EMC2Q15006 297 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 CCDC62Q6P9F0 684 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 CRELD2Q6UXH1 353 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF467Q7Z7K2 595 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF526Q8TF50 670 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-213ENST00000566756 CFAP57Q96MR6 1250 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 C11orf70Q9BRQ4 267 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 CD248Q9HCU0 757 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 PCDHB4Q9Y5E5 795 aa17.73■□□□□ 0.43
CMTM3-213ENST00000566756 TLR3O15455 904 aaKnown RBP17.72■□□□□ 0.43
CMTM3-213ENST00000566756 ZNF132P52740 706 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 NLRP11P59045 1033 aaKnown RBP17.72■□□□□ 0.43
CMTM3-213ENST00000566756 GRM1Q13255 1194 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 RASA2Q15283 850 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 FAM160B1Q5W0V3 765 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 EEPD1Q7L9B9 569 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 ANKS1BQ7Z6G8 1248 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 PCYT2Q99447 389 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 DHX33Q9H6R0 707 aaKnown RBP17.72■□□□□ 0.43
CMTM3-213ENST00000566756 TMEM134Q9H6X4 195 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 NKIRAS1Q9NYS0 192 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 RBAKQ9NYW8 714 aaPredicted RBP17.72■□□□□ 0.43
CMTM3-213ENST00000566756 PRKAG3Q9UGI9 489 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 NAALADL1Q9UQQ1 740 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 DRG1Q9Y295 367 aaKnown RBP17.72■□□□□ 0.43
CMTM3-213ENST00000566756 PPME1Q9Y570 386 aa17.72■□□□□ 0.43
CMTM3-213ENST00000566756 A0A1B0GUA9 196 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ATP2C2O75185 946 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ARIH2O95376 493 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 LSM8O95777 96 aaKnown RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 POLGP54098 1239 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 HUNKP57058 714 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 TAP1Q03518 808 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 NFX1Q12986 1120 aaKnown RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 CELF3Q5SZQ8 465 aaKnown RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 SPATA21Q7Z572 469 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 FAM228AQ86W67 206 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 UBR7Q8N806 425 aa17.71■□□□□ 0.43
CMTM3-213ENST00000566756 RBBP8NLQ8NC74 664 aaPredicted RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 APOBEC3GQ9HC16 384 aaKnown RBP17.71■□□□□ 0.43
CMTM3-213ENST00000566756 FGFR1OP2Q9NVK5 253 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms