RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
SNHG20-204ENST00000566583 ADGRF2Q8IZF7 708 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 TWNKQ96RR1 684 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 MMS19Q96T76 1030 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 HERC2P3Q9BVR0 1158 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 IMPACTQ9P2X3 320 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 HMGXB4Q9UGU5 601 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 BARX2Q9UMQ3 279 aaPredicted RBP16.56■□□□□ 0.24
SNHG20-204ENST00000566583 TRIOBPQ9H2D6 2365 aa16.56■□□□□ 0.24
SNHG20-204ENST00000566583 PLXNA3P51805 1871 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 MYO7AQ13402 2215 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 MFAP3LO75121 409 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 FGF18O76093 207 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 OAZ2O95190 189 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 SOD2P04179 222 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 RB1P06400 928 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 PNMA6AP0CW24 399 aaPredicted RBP16.55■□□□□ 0.24
SNHG20-204ENST00000566583 HNRNPH3P31942 346 aaKnown RBP16.55■□□□□ 0.24
SNHG20-204ENST00000566583 CLCN1P35523 988 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 RAPGEF1Q13905 1077 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 FAM171A1Q5VUB5 890 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 UNC93AQ86WB7 457 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 GPR65Q8IYL9 337 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 TC2NQ8N9U0 490 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 KLHL23Q8NBE8 558 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 TMEM169Q96HH4 297 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 DNAJC7Q99615 494 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 ELOVL4Q9GZR5 314 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 NKX2-4Q9H2Z4 354 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 AIPL1Q9NZN9 384 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 DSEQ9UL01 958 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 LZTS1Q9Y250 596 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 STXBP5LQ9Y2K9 1186 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 TIMM13Q9Y5L4 95 aaPredicted RBP16.55■□□□□ 0.24
SNHG20-204ENST00000566583 CHD9Q3L8U1 2897 aa16.55■□□□□ 0.24
SNHG20-204ENST00000566583 PATJQ8NI35 1801 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 ARHGEF37A1IGU5 675 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 LRRC53A6NM62 1247 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 HCRTO43612 131 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 LILRB3O75022 631 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 LMO2P25791 158 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 CTNNB1P35222 781 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 SOX5P35711 763 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 NDST1P52848 882 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 RAD23BP54727 409 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 YWHAEP62258 255 aaKnown RBP16.54■□□□□ 0.24
SNHG20-204ENST00000566583 GOLGA8FQ08AF8 430 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 GOLGA8DPQ0D2H9 430 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 LRIT3Q3SXY7 679 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 RTP2Q5QGT7 225 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 KIAA0319Q5VV43 1072 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 CACNA2D4Q7Z3S7 1137 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 OLIG1Q8TAK6 271 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 SPPL3Q8TCT6 385 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 CPLX3Q8WVH0 158 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 SYN2Q92777 582 aaPredicted RBP16.54■□□□□ 0.24
SNHG20-204ENST00000566583 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
SNHG20-204ENST00000566583 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 MSRAQ9UJ68 235 aa16.54■□□□□ 0.24
SNHG20-204ENST00000566583 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
SNHG20-204ENST00000566583 RANBP2P49792 3224 aaKnown RBP16.53■□□□□ 0.24
SNHG20-204ENST00000566583 GREB1Q4ZG55 1949 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 CD58P19256 250 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 FECHP22830 423 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 DNAJB2P25686 324 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 KRT9P35527 623 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 STAT1P42224 750 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 LHX1P48742 406 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 DSG1Q02413 1049 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 VARS2Q5ST30 1063 aaKnown RBP16.53■□□□□ 0.24
SNHG20-204ENST00000566583 WDR59Q6PJI9 974 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 TMEM270Q6UE05 265 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 PPFIBP1Q86W92 1011 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 CRYBG2Q8N1P7 616 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 SLC4A11Q8NBS3 891 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 SPC24Q8NBT2 197 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
SNHG20-204ENST00000566583 LNX1Q8TBB1 728 aaPredicted RBP16.53■□□□□ 0.24
SNHG20-204ENST00000566583 PIK3R5Q8WYR1 880 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 B3GALT6Q96L58 329 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 SPAG5Q96R06 1193 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 PPP1R9BQ96SB3 815 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 TTPALQ9BTX7 342 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 ZBP1Q9H171 429 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 COLQQ9Y215 455 aaPredicted RBP16.53■□□□□ 0.24
SNHG20-204ENST00000566583 PCDHB4Q9Y5E5 795 aa16.53■□□□□ 0.24
SNHG20-204ENST00000566583 AKR1B15C9JRZ8 316 aaPredicted RBP16.52■□□□□ 0.24
SNHG20-204ENST00000566583 DNAJB1P25685 340 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 GNL1P36915 607 aaPredicted RBP16.52■□□□□ 0.24
SNHG20-204ENST00000566583 PRKCIP41743 596 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 ADKP55263 362 aaKnown RBP16.52■□□□□ 0.24
SNHG20-204ENST00000566583 UBE3AQ05086 875 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 CAMK1Q14012 370 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 HGSNATQ68CP4 663 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms