RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 CYB561D2O14569 222 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 SPTLC1O15269 473 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 VNN2O95498 520 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 GAP43P17677 238 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 TAF6P49848 677 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 POU5F1Q01860 360 aaKnown RBP12.91□□□□□ -0.34
UBR1-206ENST00000566493 CUL4AQ13619 759 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 PPP2R5DQ14738 602 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 VEPH1Q14D04 833 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 TAF12Q16514 161 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ARHGAP15Q53QZ3 475 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ZNF720Q7Z2F6 126 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
UBR1-206ENST00000566493 SFR1Q86XK3 245 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 KIAA2013Q8IYS2 634 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ATAD1Q8NBU5 361 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 FAM3CQ92520 227 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 CRISPLD1Q9H336 500 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ATXN3LQ9H3M9 355 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ZSCAN32Q9NX65 697 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 SEL1LQ9UBV2 794 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 SRPRBQ9Y5M8 271 aaKnown RBP12.91□□□□□ -0.34
UBR1-206ENST00000566493 PIAS3Q9Y6X2 628 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 TCHHQ07283 1943 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 TICRRQ7Z2Z1 1910 aa12.91□□□□□ -0.34
UBR1-206ENST00000566493 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 TISP43B9A030 160 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 DPYSL4O14531 572 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 IL18RAPO95256 599 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 CYP11A1P05108 521 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 CEBPZQ03701 1054 aaKnown RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 MTAPQ13126 283 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 PTPAQ15257 358 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 SV2CQ496J9 727 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 ERMP1Q7Z2K6 904 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 NT5DC4Q86YG4 428 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 TMC8Q8IU68 726 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 C2orf15Q8WU43 125 aaKnown RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 PSMG2Q969U7 264 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 TMEM209Q96SK2 561 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 PYM1Q9BRP8 204 aaKnown RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 IER2Q9BTL4 223 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 LMAN1LQ9HAT1 526 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 NCDNQ9UBB6 729 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 FBXO2Q9UK22 296 aaPredicted RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 STYXL1Q9Y6J8 313 aa12.9□□□□□ -0.34
UBR1-206ENST00000566493 RIF1Q5UIP0 2472 aaKnown RBP12.9□□□□□ -0.34
UBR1-206ENST00000566493 CHADO15335 359 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 SOAT2O75908 522 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 GCNT3O95395 438 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 GABRR2P28476 465 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 MLLT6P55198 1093 aaPredicted RBP12.89□□□□□ -0.35
UBR1-206ENST00000566493 SMARCB1Q12824 385 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 FZD5Q13467 585 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 TSSK4Q6SA08 328 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 GPIHBP1Q8IV16 184 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
UBR1-206ENST00000566493 DCP1BQ8IZD4 617 aaKnown RBP12.89□□□□□ -0.35
UBR1-206ENST00000566493 SYCP3Q8IZU3 236 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 OR10T2Q8NGX3 314 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 MSANTD3Q96H12 275 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 ZNF560Q96MR9 790 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 FAM126AQ9BYI3 521 aaPredicted RBP12.89□□□□□ -0.35
UBR1-206ENST00000566493 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 CHRDQ9H2X0 955 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 SCN1AP35498 2009 aa12.89□□□□□ -0.35
UBR1-206ENST00000566493 TSC2P49815 1807 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 MYMKA6NI61 221 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 KPNA7A9QM74 516 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 IDEP14735 1019 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 SYT1P21579 422 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 CCNE1P24864 410 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 CDC25CP30307 473 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 PNPLA4P41247 253 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 STAT6P42226 847 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 NRLP54845 237 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 TFAMQ00059 246 aaKnown RBP12.88□□□□□ -0.35
UBR1-206ENST00000566493 FCHO2Q0JRZ9 810 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 RESTQ13127 1097 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 ALCAMQ13740 583 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 LRRC32Q14392 662 aa12.88□□□□□ -0.35
UBR1-206ENST00000566493 ARHGAP29Q52LW3 1261 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms