RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 WIPI1Q5MNZ9 446 aaPredicted RBP11.46□□□□□ -0.58
UBFD1-205ENST00000566136 DNTTIP2Q5QJE6 756 aaKnown RBP11.46□□□□□ -0.58
UBFD1-205ENST00000566136 CCDC84Q86UT8 332 aaPredicted RBP11.46□□□□□ -0.58
UBFD1-205ENST00000566136 GALNT15Q8N3T1 639 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 CREB3L4Q8TEY5 395 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 PIBF1Q8WXW3 757 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 MUL1Q969V5 352 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 NDST4Q9H3R1 872 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 OXSMQ9NWU1 459 aa11.46□□□□□ -0.58
UBFD1-205ENST00000566136 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 KCNK3O14649 394 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 HNRNPA1P09651 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 CYP7A1P22680 504 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 MARCKSP29966 332 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ARFIP1P53367 373 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 CSE1LP55060 971 aaKnown RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 NOLC1Q14978 699 aaKnown RBP eCLIP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 TTC31Q49AM3 519 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 AKNAD1Q5T1N1 836 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 PPP1R26Q5T8A7 1209 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 KRT40Q6A162 431 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 KLHL10Q6JEL2 608 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 SDR42E1Q8WUS8 393 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 COA7Q96BR5 231 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 PRDM5Q9NQX1 630 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 MTSS1O43312 755 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 MMP20O60882 483 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 MLYCDO95822 493 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 SLC9A1P19634 815 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ITPKAP23677 461 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 GRM5P41594 1212 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ZNF75DP51815 510 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 STX1AQ16623 288 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ZACNQ401N2 412 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 KRTCAP3Q53RY4 240 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 ADALQ6DHV7 355 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 FMR1NBQ8N0W7 255 aaPredicted RBP11.45□□□□□ -0.58
UBFD1-205ENST00000566136 IGFLR1Q9H665 355 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 PREBQ9HCU5 417 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 TMEM39AQ9NV64 488 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 BACE2Q9Y5Z0 518 aa11.45□□□□□ -0.58
UBFD1-205ENST00000566136 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 H0Y626 953 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 PLOD2O00469 737 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CTAGE5O15320 804 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 HOXD10P28358 340 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 AFMP43652 599 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 FAPQ12884 760 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 IQCB1Q15051 598 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 TOR2AQ5JU69 321 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 FYB2Q5VWT5 728 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 HECAQ9UBI9 543 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 ECM29Q5VYK3 1845 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 RTL9Q8NET4 1388 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 LAMB2P55268 1798 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 ANKRD34BA5PLL1 514 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 ZSCAN5CA6NGD5 496 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CAPN8A6NHC0 703 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CCDC69A6NI79 296 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 DAPK3O43293 454 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CDKL5O76039 1030 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 SNX4O95219 450 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 SGPL1O95470 568 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 HOXA10P31260 410 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CCDC186Q7Z3E2 898 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 LRRC71Q8N4P6 559 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 SH3RF3Q8TEJ3 882 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 CELF1Q92879 486 aaKnown RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 ARHGEF2Q92974 986 aaKnown RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 ZNF764Q96H86 408 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 GSDMAQ96QA5 445 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 NACAP1Q9BZK3 213 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 MLXIPQ9HAP2 919 aa11.44□□□□□ -0.58
UBFD1-205ENST00000566136 COL1A1P02452 1464 aaPredicted RBP11.44□□□□□ -0.58
UBFD1-205ENST00000566136 PCNTO95613 3336 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 APOL1O14791 398 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 YEATS4O95619 227 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 ATP5BP06576 529 aaKnown RBP11.43□□□□□ -0.58
UBFD1-205ENST00000566136 UQCRHP07919 91 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 CCDC159P0C7I6 412 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 CLEC2LP0C7M8 214 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 POTEJP0CG39 1038 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 ALADP13716 330 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 GAP43P17677 238 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 RPIAP49247 311 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 CCR9P51686 369 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 GPR85P60893 370 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 SGMS1Q86VZ5 419 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 PLA2G4DQ86XP0 818 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 SULF2Q8IWU5 870 aa11.43□□□□□ -0.58
UBFD1-205ENST00000566136 QRSL1Q9H0R6 528 aaKnown RBP11.43□□□□□ -0.58
UBFD1-205ENST00000566136 SEPT11Q9NVA2 429 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms