RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TPPPO94811 219 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FGFR1P11362 822 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CHKAP35790 457 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 AMPD3Q01432 767 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 VPS72Q15906 364 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARL13BQ3SXY8 428 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 LMBR1LQ6UX01 489 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TXNDC2Q86VQ3 553 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 LSMEM2Q8N112 164 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PNMA5Q96PV4 448 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CDC6Q99741 560 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZMYND12Q9H0C1 365 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PUS7LQ9H0K6 701 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 TIMMDC1Q9NPL8 285 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PCSK1NQ9UHG2 260 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 POLG2Q9UHN1 485 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CLEC11AQ9Y240 323 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 LMTK3Q96Q04 1460 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MX2P20592 715 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PON1P27169 355 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 HOXD10P28358 340 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GPC3P51654 580 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NR1H2P55055 460 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 EXOC3L4Q17RC7 722 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PLEKHG4Q58EX7 1191 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RWDD4Q6NW29 188 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 KRT27Q7Z3Y8 459 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 XAGE3Q8WTP9 111 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 STARD8Q92502 1023 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD36BP1Q96IX9 119 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 COX4I2Q96KJ9 171 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 BIRC8Q96P09 236 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SH3GL1Q99961 368 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RIOK1Q9BRS2 568 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 LSM14BQ9BX40 385 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 GBA3Q9H227 469 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 UBN1Q9NPG3 1134 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 AAASQ9NRG9 546 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ATRNO75882 1429 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FAM196BA6NMK8 535 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RSL1D1O76021 490 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 PARNO95453 639 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 UQCRBP14927 111 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZAP70P43403 619 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CDK9P50750 372 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 NR1H3Q13133 447 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RASA2Q15283 850 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CLEC16AQ2KHT3 1053 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TJAP1Q5JTD0 557 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 EEPD1Q7L9B9 569 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 LRRC49Q8IUZ0 686 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 COLGALT2Q8IYK4 626 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MARVELD2Q8N4S9 558 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MYD88Q99836 296 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 KIFC3Q9BVG8 833 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CDC42EP4Q9H3Q1 356 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 PARVBQ9HBI1 364 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 RTL9Q8NET4 1388 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GOLGA8MH3BSY2 632 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 KCNA2P16389 499 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ITGA3P26006 1051 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 CDK16Q00536 496 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NFIAQ12857 509 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRMT5Q32P41 509 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 CCDC153Q494R4 210 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARL6IP4Q66PJ3 421 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 CLEC4GQ6UXB4 293 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TRIM67Q6ZTA4 783 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 PALM2Q8IXS6 379 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 NEURL2Q9BR09 285 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 STK33Q9BYT3 514 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ARMC7Q9H6L4 198 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ERVK-5Q9HDB9 667 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 THEGQ9P2T0 379 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZMYM5Q9UJ78 669 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 GIT1Q9Y2X7 761 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FAM205AQ6ZU69 1335 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MAN1A2O60476 641 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ENDOUP21128 410 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 IL9RQ01113 521 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 OTUD4Q01804 1114 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 PDK4Q16654 411 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 FANCBQ8NB91 859 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 MGARPQ8TDB4 240 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SH3RF3Q8TEJ3 882 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 CFAP36Q96G28 342 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 HGH1Q9BTY7 390 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 OLA1Q9NTK5 396 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 MTRF1LQ9UGC7 380 aaKnown RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 PCYOX1Q9UHG3 505 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 DENND2AQ9ULE3 1009 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SPATA31A5Q5VU36 1347 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SPATA31A6Q5VVP1 1343 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SPATA31A7Q8IWB4 1347 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 H7C0S8 307 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 ADSSP30520 456 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 DSG1Q02413 1049 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 TOMM20Q15388 145 aa3.06□□□□□ -1.92
CHD9-218ENST00000566029 SHROOM1Q2M3G4 852 aaPredicted RBP3.06□□□□□ -1.92
CHD9-218ENST00000566029 ZNF530Q6P9A1 599 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms