RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 E9PMD0 336 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TRDMT1O14717 391 aaKnown RBP13.88□□□□□ -0.19
RNF40-208ENST00000565995 AXIN1O15169 862 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 EXTL3O43909 919 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 ATG13O75143 517 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 RPP40O75818 363 aaKnown RBP13.88□□□□□ -0.19
RNF40-208ENST00000565995 OR4Q2P0C623 313 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 GUCY2CP25092 1073 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 ST3GAL1Q11201 340 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 PTPAQ15257 358 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 SF3A2Q15428 464 aaKnown RBP13.88□□□□□ -0.19
RNF40-208ENST00000565995 ITPRIPL2Q3MIP1 535 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TMEM196Q5HYL7 178 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TTC38Q5R3I4 469 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 STPG1Q5TH74 334 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 ITIH5Q86UX2 942 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 KBTBD6Q86V97 674 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 CAMKK1Q8N5S9 505 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 KCTD17Q8N5Z5 321 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TMEM161BQ8NDZ6 487 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 FAM200AQ8TCP9 573 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 BPIFB1Q8TDL5 484 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TMEM209Q96SK2 561 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 FAM83CQ9BQN1 747 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 RUSC1Q9BVN2 902 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 HAPLN2Q9GZV7 340 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 TASP1Q9H6P5 420 aa13.88□□□□□ -0.19
RNF40-208ENST00000565995 UBQLN1Q9UMX0 589 aaKnown RBP13.88□□□□□ -0.19
RNF40-208ENST00000565995 TIMM13Q9Y5L4 95 aaPredicted RBP13.88□□□□□ -0.19
RNF40-208ENST00000565995 DSPP15924 2871 aaKnown RBP13.87□□□□□ -0.19
RNF40-208ENST00000565995 SOBPA7XYQ1 873 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 DPYSL4O14531 572 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 SLC16A4O15374 487 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 CLDN3O15551 220 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 KCNK5O95279 499 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 PROS1P07225 676 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 CLTAP09496 248 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 MAPTP10636 758 aaKnown RBP13.87□□□□□ -0.19
RNF40-208ENST00000565995 GABRR2P28476 465 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 STRN3Q13033 797 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 ARHGAP15Q53QZ3 475 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 GPR158Q5T848 1215 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 OVOS1Q6IE37 1185 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 USP37Q86T82 979 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
RNF40-208ENST00000565995 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 CHFRQ96EP1 664 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 PGLYRP2Q96PD5 576 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 RAB34Q9BZG1 259 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 IL21Q9HBE4 155 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 SLC27A5Q9Y2P5 690 aa13.87□□□□□ -0.19
RNF40-208ENST00000565995 ADAMTS9Q9P2N4 1935 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 FAM189A1O60320 539 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 PRAMEF12O95522 483 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 CYP11A1P05108 521 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 CXCL8P10145 99 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 PLS3P13797 630 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 TUFMP49411 452 aaKnown RBP13.86□□□□□ -0.19
RNF40-208ENST00000565995 MCM2P49736 904 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 FOSBP53539 338 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 LILRA4P59901 499 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 TNK2Q07912 1038 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 KYAT1Q16773 422 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 SEZ6Q53EL9 994 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 HYIQ5T013 277 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 FSTL4Q6MZW2 842 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 PKN3Q6P5Z2 889 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 GPIHBP1Q8IV16 184 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 ATAD1Q8NBU5 361 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 TTC8Q8TAM2 541 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 SNX29Q8TEQ0 813 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 MMTAG2Q9BU76 263 aaKnown RBP13.86□□□□□ -0.19
RNF40-208ENST00000565995 SLC46A2Q9BY10 475 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 VPS45Q9NRW7 570 aa13.86□□□□□ -0.19
RNF40-208ENST00000565995 THG1LQ9NWX6 298 aaKnown RBP13.86□□□□□ -0.19
RNF40-208ENST00000565995 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 LACTBL1A8MY62 500 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 LAD1O00515 517 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 XPOTO43592 962 aaKnown RBP13.85□□□□□ -0.19
RNF40-208ENST00000565995 U2AF2P26368 475 aaKnown RBP eCLIP13.85□□□□□ -0.19
RNF40-208ENST00000565995 CDC25CP30307 473 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 PRPHP41219 470 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 TOB1P50616 345 aaPredicted RBP13.85□□□□□ -0.19
RNF40-208ENST00000565995 SMTNP53814 917 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 GUCY1B3Q02153 619 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 RUNX3Q13761 415 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 SPATA1Q5VX52 437 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 KRT79Q5XKE5 535 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 DSTYKQ6XUX3 929 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 KCNK18Q7Z418 384 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 CMTM8Q8IZV2 173 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 TTC9BQ8N6N2 239 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 C2orf15Q8WU43 125 aaKnown RBP13.85□□□□□ -0.19
RNF40-208ENST00000565995 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 LLPHQ9BRT6 129 aaKnown RBP13.85□□□□□ -0.19
RNF40-208ENST00000565995 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms