RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SSX2IPQ9Y2D8 614 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.25
SF3B3-206ENST00000565990 MTCL1Q9Y4B5 1905 aaKnown RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 TSC2P49815 1807 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 RFXAPO00287 272 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 TEX33O43247 280 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 SERPINC1P01008 464 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 TKTP29401 623 aaKnown RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 ASPAP45381 313 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 UBASH3AP57075 661 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 NOP14P78316 857 aaKnown RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 PTPN14Q15678 1187 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 FILIP1LQ4L180 1135 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 OXCT2Q9BYC2 517 aaPredicted RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 INTS2Q9H0H0 1204 aaKnown RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 PLCB1Q9NQ66 1216 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 FNIP2Q9P278 1114 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
SF3B3-206ENST00000565990 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 BACE2Q9Y5Z0 518 aa13.51□□□□□ -0.25
SF3B3-206ENST00000565990 HUS1O60921 280 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 CXCL14O95715 111 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 C1RP00736 705 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 ODC1P11926 461 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 SKILP12757 684 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 P4HA1P13674 534 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 WARSP23381 471 aaKnown RBP13.5□□□□□ -0.25
SF3B3-206ENST00000565990 PBX1P40424 430 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 LHX1P48742 406 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 GLUD2P49448 558 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 TNNC1P63316 161 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
SF3B3-206ENST00000565990 GCNT1Q02742 428 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 UBXN1Q04323 297 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
SF3B3-206ENST00000565990 FKBP15Q5T1M5 1219 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 WSCD1Q658N2 575 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 KBTBD7Q8WVZ9 684 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 PIK3R5Q8WYR1 880 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 ELMO3Q96BJ8 720 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 B3GALT6Q96L58 329 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 RTP3Q9BQQ7 232 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 SDCBP2Q9H190 292 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 TLR9Q9NR96 1032 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
SF3B3-206ENST00000565990 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 FBXL5Q9UKA1 691 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 L1RE1Q9UN81 338 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 CNTN6Q9UQ52 1028 aa13.5□□□□□ -0.25
SF3B3-206ENST00000565990 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 GOLGA6L9A6NEM1 432 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 C2orf71A6NGG8 1288 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 NOL4O94818 638 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 GNL1P36915 607 aaPredicted RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 FXR1P51114 621 aaKnown RBP eCLIP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 CDH8P55286 799 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 INCA1Q0VD86 236 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 LRMPQ12912 555 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 SMC1AQ14683 1233 aaKnown RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 PTPROQ16827 1216 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 ZNF697Q5TEC3 545 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 KLHDC7AQ5VTJ3 777 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 OVOS1Q6IE37 1185 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 SLC8B1Q6J4K2 584 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 TMC7Q7Z402 723 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 METTL23Q86XA0 190 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 CEP57Q86XR8 500 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 TTC39CQ8N584 583 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 UBR7Q8N806 425 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 KIF18AQ8NI77 898 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 RIN2Q8WYP3 895 aaPredicted RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 NT5C1BQ96P26 610 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 ACBD6Q9BR61 282 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 NIF3L1Q9GZT8 377 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 IFNKQ9P0W0 207 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 APEX2Q9UBZ4 518 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 DAAM1Q9Y4D1 1078 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 NME7Q9Y5B8 376 aa13.49□□□□□ -0.25
SF3B3-206ENST00000565990 TIMM13Q9Y5L4 95 aaPredicted RBP13.49□□□□□ -0.25
SF3B3-206ENST00000565990 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms