RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CNN3Q15417 329 aaKnown RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 TAS1R1Q7RTX1 841 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 C2CD5Q86YS7 1000 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 ELOA2Q8IYF1 753 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 LRRC56Q8IYG6 542 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 POU5F2Q8N7G0 328 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 OR7D4Q8NG98 312 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 PGBD4Q96DM1 585 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 TAF1DQ9H5J8 278 aaPredicted RBP5.04□□□□□ -1.6
LINC00561-201ENST00000565815 CORO2BQ9UQ03 480 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 TBC1D30Q9Y2I9 924 aa5.04□□□□□ -1.6
LINC00561-201ENST00000565815 RGPD2P0DJD1 1756 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 H3BUI4 141 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CD1AP06126 327 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 PEX2P28328 305 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CDC42EP1Q00587 391 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 TLE1Q04724 770 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 EXOSC9Q06265 439 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 PKN2Q16513 984 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CCDC178Q5BJE1 867 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 TCERG1LQ5VWI1 586 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 XRRA1Q6P2D8 792 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CHST15Q7LFX5 561 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 LIMS2Q7Z4I7 341 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 HEATR3Q7Z4Q2 680 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 SSH1Q8WYL5 1049 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 SLC38A3Q99624 504 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 BRIP1Q9BX63 1249 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 OSBPL6Q9BZF3 934 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 TAOK3Q9H2K8 898 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 C12orf65Q9H3J6 166 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 FBXO34Q9NWN3 711 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 SAGE1Q9NXZ1 904 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 ARFGEF2Q9Y6D5 1785 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 OTOL1A6NHN0 477 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 NT5C1B-RDH14C9J2C7 533 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 H3BML4 177 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 KPNA5O15131 536 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 ARHGAP6O43182 974 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 SASH1O94885 1247 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 SLC6A2P23975 617 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 RAP2BP61225 183 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 APOA5Q6Q788 366 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CENPQQ7L2Z9 268 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 PJA1Q8NG27 643 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 OR14A2Q96R54 314 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 P2RX7Q99572 595 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 LSM14BQ9BX40 385 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 VPS33BQ9H267 617 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 ASAP1Q9ULH1 1129 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 STXBP5LQ9Y2K9 1186 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 RFXAPO00287 272 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 DAPK3O43293 454 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 HDCP19113 662 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 CNR2P34972 360 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 GJC2Q5T442 439 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 RSPH3Q86UC2 560 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 LIX1LQ8IVB5 337 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 MB21D1Q8N884 522 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 RSAD2Q8WXG1 361 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 TNPO1Q92973 898 aaKnown RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 C1GALT1C1Q96EU7 318 aa5.03□□□□□ -1.6
LINC00561-201ENST00000565815 NEIL1Q96FI4 390 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 TEX13AQ9BXU3 409 aaPredicted RBP5.03□□□□□ -1.6
LINC00561-201ENST00000565815 FER1L6Q2WGJ9 1857 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 A0A1W2PRX2 142 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 F8W8V4 182 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CYP7B1O75881 506 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 MYL1P05976 194 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 TRIM27P14373 513 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 MALP21145 153 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CRKLP46109 303 aaKnown RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 DDR1Q08345 913 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 DUSP8Q13202 625 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SAFBQ15424 915 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 C10orf62Q5T681 223 aaPredicted RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 GFM2Q969S9 779 aaKnown RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SLC7A6OSQ96CW6 309 aaPredicted RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 PLA2G12BQ9BX93 195 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 DDX21Q9NR30 783 aaKnown RBP eCLIP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 VSX1Q9NZR4 365 aaPredicted RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CPNE7Q9UBL6 633 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.02□□□□□ -1.61
LINC00561-201ENST00000565815 OAZ3Q9UMX2 235 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 VWA7Q9Y334 891 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 ADAMTSL1Q8N6G6 1762 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CCDC78A2IDD5 438 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 F2RL2O00254 374 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 ERC2O15083 957 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SLC26A4O43511 780 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 SERPINB2P05120 415 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 VSIG10L2P0DP72 767 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 UBE4AQ14139 1066 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 CCDC93Q567U6 631 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 FAM26FQ5R3K3 315 aa5.02□□□□□ -1.61
LINC00561-201ENST00000565815 DAAM2Q86T65 1068 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms