RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 BCO2Q9BYV7 579 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 GPR62Q9BZJ7 368 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 NKX2-4Q9H2Z4 354 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 PRO3102Q9H379 93 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 SMYD3Q9H7B4 428 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 CISHQ9NSE2 258 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 DDX43Q9NXZ2 648 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 MTUS1Q9ULD2 1270 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 L1RE1Q9UN81 338 aa8.32□□□□□ -1.08
CDH1-208ENST00000565810 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 TIMM13Q9Y5L4 95 aaPredicted RBP8.32□□□□□ -1.08
CDH1-208ENST00000565810 C5orf67F2Z3F1 127 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 EPHB6O15197 1021 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 PDGFRBP09619 1106 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 FERP16591 822 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 FGFR3P22607 806 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 IGFBP6P24592 240 aaPredicted RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 DNAJB2P25686 324 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TKTP29401 623 aaKnown RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 CASP14P31944 242 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 CA8P35219 290 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 SOX5P35711 763 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 RAP1GAPP47736 663 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 GSDMDP57764 484 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TSPY1Q01534 308 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TAP1Q03518 808 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 PTK2Q05397 1052 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 INCA1Q0VD86 236 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 ASIC2Q16515 512 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 LRIT3Q3SXY7 679 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 VARS2Q5ST30 1063 aaKnown RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 SFMBT2Q5VUG0 894 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 ANKS3Q6ZW76 656 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TMC7Q7Z402 723 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 LIMS2Q7Z4I7 341 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 GPR65Q8IYL9 337 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 FBXO22Q8NEZ5 403 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 OR8K1Q8NGG5 319 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 MICAL1Q8TDZ2 1067 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 RIN2Q8WYP3 895 aaPredicted RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 SHC3Q92529 594 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 KAT5Q92993 513 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TMEM176AQ96HP8 235 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 ARID3AQ99856 593 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 ACBD6Q9BR61 282 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 HERC2P3Q9BVR0 1158 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 TTYH3Q9C0H2 523 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 SDCBP2Q9H190 292 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 NGRNQ9NPE2 291 aaKnown RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH1-208ENST00000565810 MRPL17Q9NRX2 175 aaKnown RBP8.31□□□□□ -1.08
CDH1-208ENST00000565810 CDH9Q9ULB4 789 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 KIAA1257Q9ULG3 409 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 LZTS1Q9Y250 596 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
CDH1-208ENST00000565810 OR6C75A6NL08 312 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 LRRC53A6NM62 1247 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 F8VZ95 297 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 GABRDO14764 452 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 NRDCO43847 1150 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CILPO75339 1184 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 GFPT2O94808 682 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 OAZ2O95190 189 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CXCL14O95715 111 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 GYPCP04921 128 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 PTMAP06454 111 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 PAEPP09466 180 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 LINC00271P0C7V0 271 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CTSAP10619 480 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CD19P15391 556 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 ACO1P21399 889 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 LMO2P25791 158 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 GLUD2P49448 558 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 FXR1P51114 621 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDH1-208ENST00000565810 NDST1P52848 882 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 ADKP55263 362 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 JAM2P57087 298 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 DSG1Q02413 1049 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CREMQ03060 361 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CCDC173Q0VFZ6 552 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 TBX2Q13207 712 aaPredicted RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 GPM6BQ13491 265 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 MAPRE1Q15691 268 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 PSMD5Q16401 504 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 CTXN3Q4LDR2 81 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 TAS1R1Q7RTX1 841 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 OSTM1Q86WC4 334 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 FAM71AQ8IYT1 594 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 DCP1BQ8IZD4 617 aaKnown RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 RBBP8NLQ8NC74 664 aaPredicted RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 SPPL3Q8TCT6 385 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 BCL7CQ8WUZ0 217 aaPredicted RBP8.3□□□□□ -1.08
CDH1-208ENST00000565810 POF1BQ8WVV4 589 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 ARNTL2Q8WYA1 636 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 BAP1Q92560 729 aa8.3□□□□□ -1.08
CDH1-208ENST00000565810 SYN2Q92777 582 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms