RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 NTHL1P78549 312 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 NUCB2P80303 420 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 NHLH1Q02575 133 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 MAPRE1Q15691 268 aaKnown RBP18.01■□□□□ 0.47
USB1-211ENST00000565662 SNRNP35Q16560 246 aaKnown RBP18.01■□□□□ 0.47
USB1-211ENST00000565662 KNOP1Q1ED39 458 aaKnown RBP18.01■□□□□ 0.47
USB1-211ENST00000565662 CSGALNACT2Q8N6G5 542 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 C1orf127Q8N9H9 656 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 FLCNQ8NFG4 579 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 NOC3LQ8WTT2 800 aaKnown RBP18.01■□□□□ 0.47
USB1-211ENST00000565662 CEP295NLQ96MC4 621 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 ACBD6Q9BR61 282 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 OSBPL6Q9BZF3 934 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 INTS13Q9NVM9 706 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 HCFC1R1Q9NWW0 138 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 AGAP1Q9UPQ3 857 aa18.01■□□□□ 0.47
USB1-211ENST00000565662 MRPS17Q9Y2R5 130 aaKnown RBP18.01■□□□□ 0.47
USB1-211ENST00000565662 NOTCH4Q99466 2003 aa18■□□□□ 0.47
USB1-211ENST00000565662 FAM237AA0A1B0GTK4 181 aa18■□□□□ 0.47
USB1-211ENST00000565662 PPEF2O14830 753 aa18■□□□□ 0.47
USB1-211ENST00000565662 SPTLC1O15269 473 aa18■□□□□ 0.47
USB1-211ENST00000565662 CFHP08603 1231 aa18■□□□□ 0.47
USB1-211ENST00000565662 KRT19P08727 400 aa18■□□□□ 0.47
USB1-211ENST00000565662 PFKFB1P16118 471 aa18■□□□□ 0.47
USB1-211ENST00000565662 CDC25CP30307 473 aa18■□□□□ 0.47
USB1-211ENST00000565662 HOXD11P31277 338 aaPredicted RBP18■□□□□ 0.47
USB1-211ENST00000565662 SYKP43405 635 aa18■□□□□ 0.47
USB1-211ENST00000565662 DUSP4Q13115 394 aa18■□□□□ 0.47
USB1-211ENST00000565662 PKP1Q13835 747 aa18■□□□□ 0.47
USB1-211ENST00000565662 TAF12Q16514 161 aa18■□□□□ 0.47
USB1-211ENST00000565662 PARM1Q6UWI2 310 aa18■□□□□ 0.47
USB1-211ENST00000565662 SPRYD3Q8NCJ5 442 aa18■□□□□ 0.47
USB1-211ENST00000565662 FGF14Q92915 247 aa18■□□□□ 0.47
USB1-211ENST00000565662 SMARCD2Q92925 531 aa18■□□□□ 0.47
USB1-211ENST00000565662 BORCS6Q96GS4 357 aa18■□□□□ 0.47
USB1-211ENST00000565662 FUBP3Q96I24 572 aaKnown RBP eCLIP18■□□□□ 0.47
USB1-211ENST00000565662 NELL2Q99435 816 aa18■□□□□ 0.47
USB1-211ENST00000565662 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
USB1-211ENST00000565662 MTMR12Q9C0I1 747 aa18■□□□□ 0.47
USB1-211ENST00000565662 PCIF1Q9H4Z3 704 aa18■□□□□ 0.47
USB1-211ENST00000565662 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
USB1-211ENST00000565662 UXTQ9UBK9 157 aaPredicted RBP18■□□□□ 0.47
USB1-211ENST00000565662 HPSEQ9Y251 543 aa18■□□□□ 0.47
USB1-211ENST00000565662 PCDHB5Q9Y5E4 795 aa18■□□□□ 0.47
USB1-211ENST00000565662 NCAM2O15394 837 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
USB1-211ENST00000565662 DDX6P26196 483 aaKnown RBP eCLIP17.99■□□□□ 0.47
USB1-211ENST00000565662 AFMP43652 599 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 VCPP55072 806 aaKnown RBP17.99■□□□□ 0.47
USB1-211ENST00000565662 BFSP1Q12934 665 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 PSMD6Q15008 389 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 SLC39A12Q504Y0 691 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 SLC9A9Q8IVB4 645 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 FEZF2Q8TBJ5 459 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 GPR152Q8TDT2 470 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 SCFD1Q8WVM8 642 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 RSAD2Q8WXG1 361 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 IRF7Q92985 503 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 CGRRF1Q99675 332 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 SLITRK6Q9H5Y7 841 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 PDE11AQ9HCR9 933 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 OBP2AQ9NY56 170 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
USB1-211ENST00000565662 DOCK6Q96HP0 2047 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 GOLGA8IPA6NC78 632 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 GOLGA8JA6NMD2 632 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 STK25O00506 426 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 STAU1O95793 577 aaKnown RBP17.98■□□□□ 0.47
USB1-211ENST00000565662 CEBPBP17676 345 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 TNNI1P19237 187 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 TRIM21P19474 475 aaKnown RBP17.98■□□□□ 0.47
USB1-211ENST00000565662 WEE1P30291 646 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 ATICP31939 592 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 STARD6P59095 220 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 RPL10AP62906 217 aaKnown RBP17.98■□□□□ 0.47
USB1-211ENST00000565662 SLC5A9Q2M3M2 681 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 MGAT5BQ3V5L5 792 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 WSCD1Q658N2 575 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 CWF19L1Q69YN2 538 aaKnown RBP17.98■□□□□ 0.47
USB1-211ENST00000565662 C4orf50Q6ZRC1 276 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 PRSS33Q8NF86 280 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 ING5Q8WYH8 240 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 ASB16Q96NS5 453 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 PGLYRP2Q96PD5 576 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 IER2Q9BTL4 223 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 FGFBP2Q9BYJ0 223 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 TBC1D17Q9HA65 648 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 CEP72Q9P209 647 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 SERTAD1Q9UHV2 236 aa17.98■□□□□ 0.47
USB1-211ENST00000565662 NUP210Q8TEM1 1887 aaPredicted RBP17.98■□□□□ 0.47
USB1-211ENST00000565662 PDXKO00764 312 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 NARSO43776 548 aaKnown RBP17.97■□□□□ 0.47
USB1-211ENST00000565662 EXOC3O60645 756 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 CSH1P0DML2 217 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 CSH2P0DML3 217 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 MYL4P12829 197 aa17.97■□□□□ 0.47
USB1-211ENST00000565662 GLULP15104 373 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms